RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 COX5BP10606 129 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 PEBP1P30086 187 aaKnown RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 CCR2P41597 374 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 CDC34P49427 236 aaPredicted RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 RPL14P50914 215 aaKnown RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 CTBP2P56545 445 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 RPL26P61254 145 aaKnown RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 HLA-DRB3P79483 266 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 ERHP84090 104 aaKnown RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 COTL1Q14019 142 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 LRRC26Q2I0M4 334 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 HSP90B2PQ58FF3 399 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 SAPCD1Q5SSQ6 148 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 TNFAIP8L2Q6P589 184 aaPredicted RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 RASSF6Q6ZTQ3 369 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 FAM19A5Q7Z5A7 132 aaPredicted RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 COMMD7Q86VX2 200 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 CNEP1R1Q8N9A8 125 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 OR13C8Q8NGS7 320 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 RAB2BQ8WUD1 216 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 EEF1AKMT1Q8WVE0 214 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 SFRP2Q96HF1 295 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 ANKRD36BP1Q96IX9 119 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 NMNAT3Q96T66 252 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 MAP1LC3AQ9H492 121 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 HES4Q9HCC6 221 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 FGFR1OP2Q9NVK5 253 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 TAAR3PQ9P1P4 343 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 RPL26L1Q9UNX3 145 aaKnown RBP0.91□□□□□ -2.26
SSB-207ENST00000465871 A0A1W2PP64 1363 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 COL6A6A6NMZ7 2263 aa0.91□□□□□ -2.26
SSB-207ENST00000465871 RIMS2Q9UQ26 1411 aa0.9□□□□□ -2.26
SSB-207ENST00000465871 A0A0G2JQZ4 141 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 RFPL4AA6NLU0 287 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 RFPL4AL1F8VTS6 287 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 DEXIO95424 95 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 MT-CO2P00403 227 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 APOEP02649 317 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 BPGMP07738 259 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 GABRA2P47869 451 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 XCL1P47992 114 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 RAP1GDS1P52306 607 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 EMP2P54851 167 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 CXCR4P61073 352 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 MED21Q13503 144 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 EBPQ15125 230 aaKnown RBP0.9□□□□□ -2.27
SSB-207ENST00000465871 RSU1Q15404 277 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 SPATA12Q7Z6I5 190 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 Q8N402 240 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 OR5J2Q8NH18 312 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 MS4A6EQ96DS6 147 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 CPNE2Q96FN4 548 aaPredicted RBP0.9□□□□□ -2.27
SSB-207ENST00000465871 SLC35G5Q96KT7 338 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 TTTY13Q9BZ97 58 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 CXorf21Q9HAI6 301 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 FKBP14Q9NWM8 211 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 NKIRAS1Q9NYS0 192 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 USE1Q9NZ43 259 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 DKKL1Q9UK85 242 aa0.9□□□□□ -2.27
SSB-207ENST00000465871 POLR3HQ9Y535 204 aaPredicted RBP0.9□□□□□ -2.27
SSB-207ENST00000465871 ATAD5Q96QE3 1844 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 PXDNLA1KZ92 1463 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 TRAV41A0A0B4J266 112 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 A0A1B0GVG6 124 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 TMEM269A0A1B0GVZ9 245 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 ARRDC5A6NEK1 342 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 OR6C6A6NF89 314 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 C2orf74A8MZ97 194 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 H0Y980 276 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 M0QZ92 97 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 IL3P08700 152 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 UCHL1P09936 223 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 OCM2P0CE71 109 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 ZNF728P0DKX0 622 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 RPL12P30050 165 aaKnown RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 SLCO1A2P46721 670 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 RPL27AP46776 148 aaKnown RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 TBPL1P62380 186 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 RPS24P62847 133 aaKnown RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 HOXC5Q00444 222 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 MLLT11Q13015 90 aaPredicted RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 UAP1Q16222 522 aaPredicted RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 FAM78BQ5VT40 261 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 SLC35E3Q7Z769 313 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 LHFPL1Q86WI0 220 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 LRRC28Q86X40 367 aaPredicted RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 UBL4BQ8N7F7 174 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 ZNF283Q8N7M2 679 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 OR2T27Q8NH04 317 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 DCANP1Q8TF63 244 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 RNASE6Q93091 150 aaKnown RBP0.89□□□□□ -2.27
SSB-207ENST00000465871 TESCQ96BS2 214 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 Q9BRP9 147 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 TMEM222Q9H0R3 208 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 HRASLSQ9HDD0 168 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 POLR1DQ9Y2S0 133 aa0.89□□□□□ -2.27
SSB-207ENST00000465871 ADAMTSL1Q8N6G6 1762 aa0.88□□□□□ -2.27
SSB-207ENST00000465871 DSCAMO60469 2012 aa0.88□□□□□ -2.27
SSB-207ENST00000465871 TRGV5A0A0B4J1U4 118 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms