RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CCDC121Q6ZUS5 278 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 DAND5Q8N907 189 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 RPS4Y2Q8TD47 263 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 SPACA4Q8TDM5 124 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 SLC35G5Q96KT7 338 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 KCTD7Q96MP8 289 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 OR52B2Q96RD2 323 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 TIPINQ9BVW5 301 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 KDM5BQ9UGL1 1544 aa1.23□□□□□ -2.21
SMC4-205ENST00000465563 IGLV3-9A0A075B6K5 115 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 A0A087WUU8 490 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 C5orf49A4QMS7 147 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 CETN3O15182 167 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 COX5BP10606 129 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 CTBP2P56545 445 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 MAP3K7CLP57077 242 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 TMEM33P57088 247 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 FKBP1AP62942 108 aaKnown RBP1.22□□□□□ -2.21
SMC4-205ENST00000465563 SLC36A2Q495M3 483 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 Q6ZRN7 208 aaPredicted RBP1.22□□□□□ -2.21
SMC4-205ENST00000465563 GLT6D1Q7Z4J2 308 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 GPHB5Q86YW7 130 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 BAP18Q8IXM2 172 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 FAM9CQ8IZT9 166 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 SLC35F6Q8N357 371 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 Q8N402 240 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 HAVCR2Q8TDQ0 301 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 DCANP1Q8TF63 244 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 EEF1AKMT1Q8WVE0 214 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 FGF13Q92913 245 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 DHRS9Q9BPW9 319 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 HDHD2Q9H0R4 259 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 HES4Q9HCC6 221 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 RTEL1-TNFRSF6BF6WH68 1400 aa1.22□□□□□ -2.21
SMC4-205ENST00000465563 COL4A1P02462 1669 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 PXDNLA1KZ92 1463 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 A0A1W2PQD3 144 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 C9JCJ5 164 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 TAS2R30P59541 319 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 BTN3A2P78410 334 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 HOXC5Q00444 222 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 MLLT11Q13015 90 aaPredicted RBP1.21□□□□□ -2.22
SMC4-205ENST00000465563 PLPPR5Q32ZL2 321 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 CMTM5Q96DZ9 223 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 SFRP2Q96HF1 295 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 NDUFB11Q9NX14 153 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 POLR3HQ9Y535 204 aaPredicted RBP1.21□□□□□ -2.22
SMC4-205ENST00000465563 ATP6V1DQ9Y5K8 247 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 KIF15Q9NS87 1388 aa1.21□□□□□ -2.22
SMC4-205ENST00000465563 ZFHX2Q9C0A1 2572 aaPredicted RBP1.2□□□□□ -2.22
SMC4-205ENST00000465563 TRGV5A0A0B4J1U4 118 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 C2orf74A8MZ97 194 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 APOMO95445 188 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 KRT75O95678 551 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 NPYP01303 97 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 ZNF90Q03938 601 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 SAPCD1Q5SSQ6 148 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 SBSNQ6UWP8 590 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 FAM151BQ6UXP7 276 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 Q6ZTI0 123 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 NAA40Q86UY6 237 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 PACRGLQ8N7B6 248 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 TMEM161BQ8NDZ6 487 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 OR4X1Q8NH49 305 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 ZNF625Q96I27 306 aaPredicted RBP1.2□□□□□ -2.22
SMC4-205ENST00000465563 MIEN1Q9BRT3 115 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 TMEM109Q9BVC6 243 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 TIMM21Q9BVV7 248 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 TMEM222Q9H0R3 208 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 C15orf41Q9Y2V0 281 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 RALGAPA2Q2PPJ7 1873 aa1.2□□□□□ -2.22
SMC4-205ENST00000465563 A0A0A6YYH2 397 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 ARRDC5A6NEK1 342 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 A6NJ64 397 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 BHLHE40O14503 412 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 UBE2L6O14933 153 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 CCL1P22362 96 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 DDTP30046 118 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 GABRA2P47869 451 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 TBPL1P62380 186 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 PPP1R1AQ13522 171 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 UAP1Q16222 522 aaPredicted RBP1.19□□□□□ -2.22
SMC4-205ENST00000465563 ZNF791Q3KP31 576 aaPredicted RBP1.19□□□□□ -2.22
SMC4-205ENST00000465563 C1orf194Q5T5A4 169 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 N4BP2L1Q5TBK1 243 aaPredicted RBP1.19□□□□□ -2.22
SMC4-205ENST00000465563 CST9Q5W186 159 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 TNFAIP8L2Q6P589 184 aaPredicted RBP1.19□□□□□ -2.22
SMC4-205ENST00000465563 LHFPL1Q86WI0 220 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 ANKRD36BP1Q96IX9 119 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 CCL13Q99616 98 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 TTTY13Q9BZ97 58 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 POLR1DQ9Y2S0 133 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 ABCC11Q96J66 1382 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 HEATR5BQ9P2D3 2071 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 MAST2Q6P0Q8 1798 aa1.19□□□□□ -2.22
SMC4-205ENST00000465563 DENND4BO75064 1496 aaPredicted RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 INTS1Q8N201 2190 aaKnown RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 ZNF532Q9HCE3 1301 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 MED12LQ86YW9 2145 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 CUL9Q8IWT3 2517 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms