RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 EXOSC2Q13868 293 aaKnown RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 GNMTQ14749 295 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 FAM71E2Q8N5Q1 922 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 OR51H1Q8NH63 302 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 CCL17Q92583 94 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 A0A1B0GW55 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 H0YIZ8 118 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 K7EPK0 472 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 TNFSF12O43508 249 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 NDUFB3O43676 98 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L2P0CJ85 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L3P0CJ86 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L4P0CJ87 422 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L5P0CJ88 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L6P0CJ89 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4L7P0CJ90 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 S100A1P23297 94 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 OMGP23515 440 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 GPR12P47775 334 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 P2RY1P47900 373 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 Q3ZCU0 254 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 MORN2Q502X0 79 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 FAM201AQ5SY85 155 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 GPR157Q5UAW9 335 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 RNASE11Q8TAA1 199 aaKnown RBP11.29□□□□□ -0.6
HDAC6-215ENST00000465457 STOML3Q8TAV4 291 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 UBALD1Q8TB05 177 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 SCARB1Q8WTV0 552 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
HDAC6-215ENST00000465457 DUX4Q9UBX2 424 aa11.29□□□□□ -0.6
HDAC6-215ENST00000465457 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 F5H0A9 414 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 GPR37O15354 613 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 SCGB1D2O95969 90 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 MBPP02686 304 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 LOXL3P58215 753 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 RFESDQ8TAC1 157 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 OR5AC2Q9NZP5 309 aa11.28□□□□□ -0.6
HDAC6-215ENST00000465457 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
HDAC6-215ENST00000465457 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 TNFRSF13BO14836 293 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ADAM20O43506 726 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 NDUFB7P17568 137 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 RPL12P30050 165 aaKnown RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ARHGDIBP52566 201 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 AKR1C2P52895 323 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 C17orf58Q2M2W7 97 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 OR8H3Q8N146 312 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ST8SIA2Q92186 375 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 AGMATQ9BSE5 352 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ZNF471Q9BX82 626 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 PSG11Q9UQ72 335 aa11.27□□□□□ -0.61
HDAC6-215ENST00000465457 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-215ENST00000465457 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 WRBO00258 174 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 GPR137BO60478 399 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 SELLP14151 372 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
HDAC6-215ENST00000465457 FOXRED2Q8IWF2 684 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 LRRC20Q8TCA0 184 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 WFDC12Q8WWY7 111 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 SDHAF2Q9NX18 166 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 DCAF16Q9NXF7 216 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
HDAC6-215ENST00000465457 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 A0A1W2PPH5 198 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 LINC00862A6NCI5 91 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms