RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 OR52B4Q8NGK2 314 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 PHYHIPQ92561 330 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 RCC2Q9P258 522 aaKnown RBP11.1□□□□□ -0.63
HDAC6-214ENST00000465269 AK6Q9Y3D8 172 aaKnown RBP11.1□□□□□ -0.63
HDAC6-214ENST00000465269 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 H0YJW9 148 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 ARL6IP5O75915 188 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF93P35789 620 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-214ENST00000465269 LSM3P62310 102 aaKnown RBP11.09□□□□□ -0.63
HDAC6-214ENST00000465269 ASCL4Q6XD76 172 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 LRRTM1Q86UE6 522 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 JAGN1Q8N5M9 183 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 RNF183Q96D59 192 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 CENPOQ9BU64 300 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 FUNDC2Q9BWH2 189 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 TINAGL1Q9GZM7 467 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-214ENST00000465269 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
HDAC6-214ENST00000465269 AIREO43918 545 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 PRH1P02810 166 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 GALP22466 123 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 FGF9P31371 208 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-214ENST00000465269 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.64
HDAC6-214ENST00000465269 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 C6orf183Q5T699 404 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 GPR107Q5VW38 600 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 DRAXINQ8NBI3 349 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-214ENST00000465269 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 TP53TG1Q9Y2A0 90 aa11.08□□□□□ -0.64
HDAC6-214ENST00000465269 A0A0B4J203 849 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 SMIM30A4D0T7 59 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 PPP5D1E7EU14 171 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 H3BUA1 57 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 M0R2N4 97 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 ATF4P18848 351 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-214ENST00000465269 AADACP22760 399 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 MYL9P24844 172 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 TGFBR1P36897 503 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 NHLRC3Q5JS37 347 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 Q6ZWC4 215 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 GFI1Q99684 422 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 NAA50Q9GZZ1 169 aaKnown RBP11.07□□□□□ -0.64
HDAC6-214ENST00000465269 METTL9Q9H1A3 318 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
HDAC6-214ENST00000465269 TRAV1-2A0A0B4J238 106 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 UBE2QL1A1L167 161 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 IGLL5B9A064 214 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 SLC22A1O15245 554 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-214ENST00000465269 OR10A3P58181 314 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 MXD1Q05195 221 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 TMEM30BQ3MIR4 351 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 TIMM50Q3ZCQ8 353 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 SLC22A6Q4U2R8 563 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 GLT8D1Q68CQ7 371 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 GVQW1Q8N7I0 195 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 KCNG3Q8TAE7 436 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 CPNE2Q96FN4 548 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-214ENST00000465269 ABHD14BQ96IU4 210 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 MBNL3Q9NUK0 354 aaKnown RBP11.06□□□□□ -0.64
HDAC6-214ENST00000465269 MLXQ9UH92 298 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 UBQLN2Q9UHD9 624 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
HDAC6-214ENST00000465269 FAM90A23PA8MXZ1 464 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 PDCD5O14737 125 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 DEFB4AO15263 64 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 CLEC2LP0C7M8 214 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
HDAC6-214ENST00000465269 SDC2P34741 201 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
HDAC6-214ENST00000465269 RBMS2Q15434 407 aaKnown RBP11.05□□□□□ -0.64
HDAC6-214ENST00000465269 MPV17LQ2QL34 196 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 CDH26Q8IXH8 852 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 NKAIN3Q8N8D7 197 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 OR2AK2Q8NG84 335 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 C2CD4CQ8TF44 421 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 S100A13Q99584 98 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 AKIP1Q9NQ31 210 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-214ENST00000465269 JPT1Q9UK76 154 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 V9GY05 133 aa11.05□□□□□ -0.64
HDAC6-214ENST00000465269 OR5H14A6NHG9 310 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 RAB3BP20337 219 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 VBP1P61758 197 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 NCS1P62166 190 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
HDAC6-214ENST00000465269 RHOGP84095 191 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 HES5Q5TA89 166 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 AWAT2Q6E213 333 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 GLIPR1L1Q6UWM5 242 aa11.04□□□□□ -0.64
HDAC6-214ENST00000465269 CLVS1Q8IUQ0 354 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-214ENST00000465269 GAPTQ8N292 157 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms