RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 LIN54Q6MZP7 749 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 GLDNQ6ZMI3 551 aaPredicted RBP10.85□□□□□ -0.67
LIMD1-203ENST00000465039 SLC38A6Q8IZM9 456 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
LIMD1-203ENST00000465039 ZNF486Q96H40 463 aaPredicted RBP10.85□□□□□ -0.67
LIMD1-203ENST00000465039 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 V9GYH0 126 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 CD3DP04234 171 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 GNRHRP30968 328 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
LIMD1-203ENST00000465039 FXYD4P59646 89 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 AP3S2P59780 193 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 UBE2KP61086 200 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 SLC35B1P78383 322 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 PSG5Q15238 335 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 SURF2Q15527 256 aaPredicted RBP10.84□□□□□ -0.67
LIMD1-203ENST00000465039 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 Q6ZS46 218 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 LHFPL1Q86WI0 220 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 CADM3Q8N126 398 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 OR6Q1Q8NGQ2 317 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 VSTM2AQ8TAG5 236 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 CCL28Q9NRJ3 127 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
LIMD1-203ENST00000465039 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 A6NHS1 94 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 HAX1O00165 279 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 GPR31O00270 319 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 SHOXO15266 292 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 FBXO24O75426 580 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 RAB3DO95716 219 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 FCER2P06734 321 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 AKAIN1P0CW23 69 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 VSIG10L2P0DP72 767 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 SLC6A1P30531 599 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
LIMD1-203ENST00000465039 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 AADACL3Q5VUY0 350 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 ZNF818PQ6ZRF7 136 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 TEX45Q8NA69 505 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 POC5Q8NA72 575 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 OR4X2Q8NGF9 303 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 PRRT1Q99946 306 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 RSRP1Q9BUV0 290 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 FXYD6Q9H0Q3 95 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 OR51J1Q9H342 316 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 SLC2A8Q9NY64 477 aa10.83□□□□□ -0.68
LIMD1-203ENST00000465039 PSMB11A5LHX3 300 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 M0QZ24 198 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 B3GALNT1O75752 331 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 CRYZL1O95825 349 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 HRASP01112 189 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 OPN1MWP04001 364 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 OPN1MW2P0DN77 364 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 OPN1MW3P0DN78 364 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 FAUP35544 74 aaKnown RBP10.82□□□□□ -0.68
LIMD1-203ENST00000465039 RND3P61587 244 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 PLGLAQ15195 96 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
LIMD1-203ENST00000465039 Q8N402 240 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 STPG2Q8N412 459 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 GDPD1Q8N9F7 314 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 TERB2Q8NHR7 220 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 RITA1Q96K30 269 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 TINAGL1Q9GZM7 467 aaPredicted RBP10.82□□□□□ -0.68
LIMD1-203ENST00000465039 PLEKHA2Q9HB19 425 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
LIMD1-203ENST00000465039 MGAM2Q2M2H8 2515 aa10.82□□□□□ -0.68
LIMD1-203ENST00000465039 IGHV7-81A0A0B4J1V7 117 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 M0QYG6 137 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 SLC25A17O43808 307 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 FCGR3BO75015 233 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 CRYGBP07316 175 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 VDAC1P21796 283 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 CNTFRP26992 372 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 TAS2R31P59538 309 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 RPL30P62888 115 aaKnown RBP10.81□□□□□ -0.68
LIMD1-203ENST00000465039 ZNF45Q02386 682 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 ZNF79Q15937 498 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 C2orf68Q2NKX9 166 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 TMEM95Q3KNT9 176 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 OR5AU1Q8NGC0 362 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 TMEM68Q96MH6 324 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 HSPB9Q9BQS6 159 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 THAP7Q9BT49 309 aaPredicted RBP10.81□□□□□ -0.68
LIMD1-203ENST00000465039 FBXL15Q9H469 300 aa10.81□□□□□ -0.68
LIMD1-203ENST00000465039 J3QRK9 145 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms