RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SLC25A29Q8N8R3 303 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 TMEM105Q8N8V8 129 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 LY6G5BQ8NDX9 201 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 OR11H6Q8NGC7 330 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 OR52L1Q8NGH7 329 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 ZNRF2Q8NHG8 242 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 GRPEL2Q8TAA5 225 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 LHFPL5Q8TAF8 219 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 C11orf40Q8WZ69 217 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 MS4A6EQ96DS6 147 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 SLC25A44Q96H78 314 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-205ENST00000464541 TRIB3Q96RU7 358 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 PBDC1Q9BVG4 233 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 GGTLC1Q9BX51 225 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 ZNF436Q9C0F3 470 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-205ENST00000464541 COMMD5Q9GZQ3 224 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 ABCG5Q9H222 651 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 PRTFDC1Q9NRG1 225 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 LYRM2Q9NU23 88 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-205ENST00000464541 TAS2R1Q9NYW7 299 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 SSR3Q9UNL2 185 aa2.84□□□□□ -1.95
PTCD3-205ENST00000464541 PCYT1BQ9Y5K3 369 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-205ENST00000464541 RTL1A6NKG5 1358 aa2.84□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM131Q92545 1883 aa2.84□□□□□ -1.96
PTCD3-205ENST00000464541 LOC102724200A0A096LPH7 203 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 MAP1LC3B2A6NCE7 125 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 A8MWL6 223 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 E7EQ34 232 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 KPNA4O00629 521 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ISLRO14498 428 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 HMGB3O15347 200 aaKnown RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 DEDDO75618 318 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 NDUFC2O95298 119 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 CRYZL1O95825 349 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 IGHG2P01859 326 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 SERPINE1P05121 402 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ORM2P19652 201 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ERP29P30040 261 aaKnown RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 GABRA3P34903 492 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 IL15RAQ13261 267 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 APOFQ13790 326 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM128Q5BJH2 165 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 SAMD13Q5VXD3 122 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TOMM20LQ6UXN7 152 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ALKAL1Q6UXT8 129 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 GOLT1AQ6ZVE7 132 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TCF23Q7RTU1 214 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF567Q8N184 647 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF645Q8N7E2 425 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ZDHHC22Q8N966 263 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 GDPD1Q8N9F7 314 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF555Q8NEP9 628 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ROPN1LQ96C74 230 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ABHD14BQ96IU4 210 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TBX5Q99593 518 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 CDX2Q99626 313 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 CGREF1Q99674 301 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 MAP1LC3BQ9GZQ8 125 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 MED28Q9H204 178 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 SH3BGRL3Q9H299 93 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 PLEKHF2Q9H8W4 249 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 PARVBQ9HBI1 364 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM138Q9NPI0 162 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 C14orf105Q9NVL8 296 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 DNAJC12Q9UKB3 198 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 OR52A1Q9UKL2 312 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF706Q9Y5V0 76 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-205ENST00000464541 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 VWA8A3KMH1 1905 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 TONSLQ96HA7 1378 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 NCOA3Q9Y6Q9 1424 aa2.83□□□□□ -1.96
PTCD3-205ENST00000464541 C2orf16Q68DN1 1984 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 IGHV1-69-2A0A0G2JMI3 117 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 ARL5CA6NH57 179 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 OR4C45A6NMZ5 311 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 H7C1C5 153 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 MRASO14807 208 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 POP7O75817 140 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 CXorf1O96002 111 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 HLA-DRB1P01911 266 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 APOA2P02652 100 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 PFN1P07737 140 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 CYBAP13498 195 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 SNRPD2P62316 118 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 LCN6P62502 163 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 HERVK_113P63121 156 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 GNA12Q03113 381 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 FUT5Q11128 374 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 BRMS1LQ5PSV4 323 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 FAM24BQ8N5W8 94 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 OR52N1Q8NH53 320 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 RNASE11Q8TAA1 199 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 FAM57AQ8TBR7 257 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 THTPAQ9BU02 230 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 CHCHD7Q9BUK0 85 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms