RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RAB9BQ9NP90 201 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC35D1Q9NTN3 355 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 TRAPPC2LQ9UL33 140 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 WDR83OSQ9Y284 106 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 RFNGQ9Y644 331 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 CACNA1GO43497 2377 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 TRGV10A0A0A0MS01 117 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 IGKV1-6A0A0C4DH72 117 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 A0A0G2JRQ6 117 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 A0A0J9YW62 118 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 A0A1W2PN81 502 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 TMEM30CPA0ZSE6 113 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 DIRC3C9JPN6 131 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 FNDC10F2Z333 226 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 CDIPTO14735 213 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 YPEL1O60688 119 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPL33O75394 65 aaKnown RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 NXPH3O95157 252 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 IRF2P14316 349 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 AREGP15514 252 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MDKP21741 143 aaPredicted RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 KIR2DS2P43631 304 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 GPM6AP51674 278 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPS11P82912 194 aaKnown RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 ARL16Q0P5N6 197 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPL49Q13405 166 aaKnown RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 IL11RAQ14626 422 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 TPTE2P1Q5T6R2 138 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF497Q6ZNH5 498 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 C1orf174Q8IYL3 243 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 C11orf42Q8N5U0 333 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF738Q8NE65 137 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 OR1L6Q8NGR2 347 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 OR52E5Q8NH55 327 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 IL1F10Q8WWZ1 152 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 C22orf15Q8WYQ4 148 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 C11orf52Q96A22 123 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 GALMQ96C23 342 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 STARD4Q96DR4 205 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 YPEL2Q96QA6 119 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 OR6C1Q96RD1 312 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 ELOVL1Q9BW60 279 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 TMEM167BQ9NRX6 74 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 OCIAD1Q9NX40 245 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 DLL3Q9NYJ7 618 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPL27Q9P0M9 148 aaKnown RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 PPP1R3CQ9UQK1 317 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPS17Q9Y2R5 130 aaKnown RBP6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 ADAMTS20P59510 1910 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 DNAH12Q6ZR08 3092 aa6.05□□□□□ -1.44
CLSTN1-204ENST00000464286 SHANK1Q9Y566 2161 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 IGKV3D-15A0A087WSY6 115 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 OOEPA6NGQ2 149 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF716A6NP11 495 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 G3V3Y1 287 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 K7EP13 123 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 FCN1O00602 326 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 ZIC3O60481 467 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 RBMXL2O75526 392 aaKnown RBP6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 NDUFB4O95168 129 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 JMJD7P0C870 316 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TDGF1P13385 188 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 SELEP16581 610 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 PTTG1IPP53801 180 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TMPRSS3P57727 454 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 UBE2G2P60604 165 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 ERVK-16P61578 105 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 GNB1P62873 340 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TFF2Q03403 129 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 HYAL1Q12794 435 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 RTP5Q14D33 572 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 GABRA6Q16445 453 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TIGITQ495A1 244 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 MORN2Q502X0 79 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 DMRTC1Q5HYR2 192 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 FBXW9Q5XUX1 488 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 FBXO46Q6PJ61 603 aaPredicted RBP6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 Q6ZPA2 131 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 Q6ZRM9 215 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 C17orf78Q8N4C9 275 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 DRAM1Q8N682 238 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 VN1R17PQ8TDU5 208 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TMEM190Q8WZ59 177 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 RDH5Q92781 318 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 KCNS1Q96KK3 526 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 COMMD5Q9GZQ3 224 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 DNAJC4Q9NNZ3 241 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 OSTCQ9NRP0 149 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 AURKAIP1Q9NWT8 199 aaPredicted RBP6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 MTCH1Q9NZJ7 389 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 B4GALT7Q9UBV7 327 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC25A10Q9UBX3 287 aaPredicted RBP6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 TBL2Q9Y4P3 447 aaKnown RBP6.04□□□□□ -1.44
CLSTN1-204ENST00000464286 SEC16AO15027 2179 aa6.03□□□□□ -1.44
CLSTN1-204ENST00000464286 IGHV3-15A0A0B4J1V0 119 aa6.03□□□□□ -1.44
CLSTN1-204ENST00000464286 TRAV24A0A0B4J272 114 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms