RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 TMEM128Q5BJH2 165 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 OR2B11Q5JQS5 317 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 SPAG16Q8N0X2 631 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 TCTEX1D1Q8N7M0 179 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 OR2T10Q8NGZ9 312 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 OR5R1Q8NH85 324 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 SSMEM1Q8WWF3 244 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 GALNT14Q96FL9 552 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 MARVELD1Q9BSK0 173 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 PLSCR3Q9NRY6 295 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 TEX13DA0A0J9YY54 714 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 H0Y980 276 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 H7C2Y5 167 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 MOSP00540 346 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 UCP1P25874 307 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 UBE2MP61081 183 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 RTL8BQ17RB0 113 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 SP6Q3SY56 376 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 GLYATL2Q8WU03 294 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 RNF5Q99942 180 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 LIN7CQ9NUP9 197 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 POMT1Q9Y6A1 747 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 B3GALNT1O75752 331 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 CRYZL1O95825 349 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 OR5AC1P0C628 307 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 OR4E1P0C645 316 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 CNTFRP26992 372 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 LPAR6P43657 344 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 RAG2P55895 527 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 TAS2R31P59538 309 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 HILS1P60008 231 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 PPP1R1AQ13522 171 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 HES1Q14469 280 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 HNF4GQ14541 408 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 TMEM187Q14656 261 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 OXA1LQ15070 435 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 SLC9A3R2Q15599 337 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 LY6EQ16553 131 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 SGPP2Q8IWX5 399 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 CD300LFQ8TDQ1 290 aa11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-203ENST00000463428 CUBNO60494 3623 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 TNCP24821 2201 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 INMT-MINDY4F8WBC2 141 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 CLDN34H7C241 214 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 PEX14O75381 377 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 S1PR2O95136 353 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 SFT2D2O95562 160 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 HPRT1P00492 218 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM11P17152 192 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 F2RL1P55085 397 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 NPBQ8NG41 125 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 LHFPL5Q8TAF8 219 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 BEX1Q9HBH7 125 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 PITPNC1Q9UKF7 332 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
PHACTR4-203ENST00000463428 A0A0A6YYJ9 748 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 CHST1O43916 411 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 OR2F2O95006 317 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 NDUFA3O95167 84 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 CDS2O95674 445 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 IL5P05113 134 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 CRYGBP07316 175 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 LGALS7P47929 136 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 RAB25P57735 213 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 POU2AF1Q16633 256 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM56Q96MV1 263 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 DUX5Q96PT3 197 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 TMEM56-RWDD3S4R434 201 aa11.07□□□□□ -0.64
PHACTR4-203ENST00000463428 SHOXO15266 292 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 IFNA2P01563 188 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 AMY1AP04745 511 aa11.06□□□□□ -0.64
PHACTR4-203ENST00000463428 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms