RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-204	ENST00000463421	FAM223A	Q8IWN6	122 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	DEFB125	Q8N687	156 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	PACRGL	Q8N7B6	248 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	BPIFB6	Q8NFQ5	453 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	OR4A4P	Q8NGN8	299 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	MND1	Q9BWT6	205 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	SRD5A3	Q9H8P0	318 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	RBMY1B	A6NDE4	496 aa	Known RBP	11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	RBMY1E	A6NEQ0	496 aa	Known RBP	11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	SLC17A2	O00624	439 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	BET1	O15155	118 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	FABP7	O15540	132 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	TUSC2	O75896	110 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	GNAO1	P09471	354 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	UCHL1	P09936	223 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	RBMY1D	P0C7P1	496 aa	Known RBP	11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	RRAS	P10301	218 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	MRPS15	P82914	257 aa	Known RBP	11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	ATP5G2	Q06055	141 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	MRGPRG-AS1	Q2M3A8	158 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	VMA21	Q3ZAQ7	101 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	SRSF12	Q8WXF0	261 aa	Known RBP	11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	ACOT12	Q8WYK0	555 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	WFDC10A	Q9H1F0	79 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	AKIP1	Q9NQ31	210 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	FKBP14	Q9NWM8	211 aa		11.16	□□□□□ -0.62
NFX1-204	ENST00000463421	SRRM4	A7MD48	611 aa	Known RBP	11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	ZNF785	A8K8V0	405 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	OR11H12	B2RN74	326 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	PRH1	P02810	166 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	CD3G	P09693	182 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	UBE2K	P61086	200 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	RAB11B	Q15907	218 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	PRSS8	Q16651	343 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	GUCA2B	Q16661	112 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	PLAC9	Q5JTB6	97 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	TEX45	Q8NA69	505 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	OR56B1	Q8NGI3	324 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	OR10J5	Q8NHC4	309 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	C5orf30	Q96GV9	206 aa		11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	RBM7	Q9Y580	266 aa	Known RBP	11.15	□□□□□ -0.62
NFX1-204	ENST00000463421	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	CRYZL1	O95825	349 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	CDK1	P06493	297 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	ZNF45	Q02386	682 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	TPBG	Q13641	420 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	SPHAR	Q15513	63 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	MED22	Q15528	200 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	DEFB114	Q30KQ6	69 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	IGSF11	Q5DX21	431 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	IDO2	Q6ZQW0	420 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	FBLIM1	Q8WUP2	373 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	KCTD12	Q96CX2	325 aa	Known RBP	11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	ADTRP	Q96IZ2	230 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	GFI1	Q99684	422 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	CABLES2	Q9BTV7	478 aa		11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	AK6	Q9Y3D8	172 aa	Known RBP	11.14	□□□□□ -0.63
NFX1-204	ENST00000463421	TRBV6-7	A0A0A0MS04	114 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	TRBV9	A0A0B4J1U6	114 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	CREBL2	O60519	120 aa	Predicted RBP	11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	ACTL6B	O94805	426 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	FCGR3A	P08637	254 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	GSTT2	P0CG29	244 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	GSTT2B	P0CG30	244 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	CLDN12	P56749	244 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	NECAP1	Q8NC96	275 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	LINC00476	Q8WZB0	136 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	DDB2	Q92466	427 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	UFD1	Q92890	307 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	TMEM203	Q969S6	136 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	ZC4H2	Q9NQZ6	224 aa		11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	TECR	Q9NZ01	308 aa	Known RBP	11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	LSM2	Q9Y333	95 aa	Known RBP	11.13	□□□□□ -0.63
NFX1-204	ENST00000463421	C2orf70	A6NJV1	201 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	PPP5D1	E7EU14	171 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	DENR	O43583	198 aa	Known RBP	11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	ARL6IP5	O75915	188 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	DIRAS3	O95661	229 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	FOLR2	P14207	255 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	EDN2	P20800	178 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	KIR2DS2	P43631	304 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	C2orf76	Q3KRA6	126 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	FAM209B	Q5JX69	171 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	LIPK	Q5VXJ0	399 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	SLC16A13	Q7RTY0	426 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	OSR1	Q8TAX0	266 aa	Predicted RBP	11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	FAM3D	Q96BQ1	224 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	WDR89	Q96FK6	387 aa	Predicted RBP	11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	SPIN2A	Q99865	258 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	SPIN2B	Q9BPZ2	258 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	GINS4	Q9BRT9	223 aa		11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.12	□□□□□ -0.63
NFX1-204	ENST00000463421	PTGES3L	E9PB15	166 aa		11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	GGCT	O75223	188 aa	Known RBP	11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	OR2J3	O76001	311 aa		11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	DUT	P33316	252 aa	Known RBP	11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	RANBP1	P43487	201 aa		11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	CDK10	Q15131	360 aa		11.11	□□□□□ -0.63
NFX1-204	ENST00000463421	C15orf32	Q32M92	178 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms