RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 SRRQ9GZT4 340 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 RAB1BQ9H0U4 201 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CST11Q9H112 138 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ATG5Q9H1Y0 275 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LIME1Q9H400 295 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 HMG20AQ9NP66 347 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 FAIMQ9NVQ4 179 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 TREM2Q9NZC2 230 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CLN8Q9UBY8 286 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 RAB22AQ9UL26 194 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 RNF24Q9Y225 148 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ST3GAL6Q9Y274 331 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 IGKV1D-17A0A075B6S4 117 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 IGHV3OR15-7A0A075B7D8 119 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 IGLV9-49A0A0B4J1Y8 123 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 IGHV1-69-2A0A0G2JMI3 117 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 MEIOCA2RUB1 952 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM235A6NFC5 223 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 FABP12A6NFH5 140 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 H7C417 338 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 MFNGO00587 321 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF780AO75290 641 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 RP2O75695 350 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 IGHG4P01861 327 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 HIST1H1DP16402 221 aaKnown RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 GNB3P16520 340 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 COL8A2P25067 703 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 BLVRBP30043 206 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 NR4A2P43354 598 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 RANBP1P43487 201 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 BTG1P62324 171 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 IFITM3Q01628 133 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF45Q02386 682 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF846Q147U1 533 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF146Q15072 292 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 RBMS2Q15434 407 aaKnown RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 VAMP3Q15836 100 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF181Q2M3W8 571 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM69Q5SWH9 247 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR52W1Q6IF63 320 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 Q6P435 159 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 C6orf201Q7Z4U5 140 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 Q8IYB0 196 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 C8orf31Q8N9H6 132 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR4F17Q8NGA8 305 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR5T2Q8NGG2 359 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR10R2Q8NGX6 335 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR4F5Q8NH21 305 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 CACNG8Q8WXS5 425 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 DYRK2Q92630 601 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 MRGPRFQ96AM1 343 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 MRPS24Q96EL2 167 aaKnown RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 S100A16Q96FQ6 103 aaKnown RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 SDSLQ96GA7 329 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ARHGAP5-AS1Q96IT6 56 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 OR4F4Q96R69 305 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 SULT4A1Q9BR01 284 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 MFFQ9GZY8 342 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 RHOFQ9HBH0 211 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 DIABLOQ9NR28 239 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 PPP1R3CQ9UQK1 317 aa3.76□□□□□ -1.81
CSMD3-205ENST00000462254 ANKRD17O75179 2603 aaKnown RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 USP9YO00507 2555 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-205ENST00000462254 LRRK2Q5S007 2527 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PRRC2AP48634 2157 aaKnown RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 A0A0A6YYH2 397 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 A0A1B0GW55 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 MEIS3P1A6NDR6 274 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 A6NJ64 397 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 RFPL4AA6NLU0 287 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR2AT4A6NND4 320 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 RFPL4AL1F8VTS6 287 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SIRPB1O00241 398 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SIGLEC5O15389 551 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CHST1O43916 411 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PDCD6O75340 191 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 FCN3O75636 299 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR7C1O76099 320 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR2H2O95918 312 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 HAND1O96004 215 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 IGHV4-39P01824 125 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 MELTFP08582 738 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CD3GP09693 182 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CSF3P09919 207 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L2P0CJ85 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L3P0CJ86 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L4P0CJ87 422 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L5P0CJ88 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L6P0CJ89 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L7P0CJ90 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PSG2P11465 335 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 IL7P13232 177 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 C4BPBP20851 252 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 GIFP27352 417 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 TALDO1P37837 337 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SMIM21Q3B7S5 101 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CDNFQ49AH0 187 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms