RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 OR4C12Q96R67 309 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 PPP1R2P9O14990 202 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 PTBP3O95758 552 aaKnown RBP10.38□□□□□ -0.75
COL4A6-204ENST00000461897 GRPP07492 148 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 GLRXP35754 106 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 EIF4EBP1Q13541 118 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-204ENST00000461897 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 ABHD5Q8WTS1 349 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
COL4A6-204ENST00000461897 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-204ENST00000461897 IGHV3-13P01766 116 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 CASP6P55212 293 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 SLC38A11Q08AI6 406 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 OR2B11Q5JQS5 317 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 VHLLQ6RSH7 139 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 CYP2G1PQ6ZSU1 146 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 CXXC4Q9H2H0 198 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 DUSP13Q9UII6 198 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 TRAPPC2LQ9UL33 140 aa10.37□□□□□ -0.75
COL4A6-204ENST00000461897 IGLV3-9A0A075B6K5 115 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 SOD3P08294 240 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 PRAMEF6Q5VXH4 476 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 ZNF826PQ6ZT77 177 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 FGFRL1Q8N441 504 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 TCTEX1D1Q8N7M0 179 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 FRZBQ92765 325 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 HES4Q9HCC6 221 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 PLCE1Q9P212 2302 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 CHD3Q12873 2000 aaKnown RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 PMS2P5A8MQ11 134 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 SIRPB1O00241 398 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 SH2D1BO14796 132 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 ATXN7O15265 892 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 MBP02144 154 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 KLF3P57682 345 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 HOXA4Q00056 320 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM108Q6UXF1 575 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 WFDC8Q8IUA0 241 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 RPP25LQ8N5L8 163 aaKnown RBP10.36□□□□□ -0.75
COL4A6-204ENST00000461897 RBKSQ9H477 322 aa10.36□□□□□ -0.75
COL4A6-204ENST00000461897 CTXND1A0A1B0GTU2 59 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 ZNF737O75373 536 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 KBTBD11O94819 623 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 NXPH2O95156 264 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 IGKV1D-33P01593 117 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 IGKV1-33P01594 117 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 PFN1P07737 140 aaKnown RBP10.35□□□□□ -0.75
COL4A6-204ENST00000461897 CEACAM6P40199 344 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 FGF8P55075 233 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-204ENST00000461897 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-204ENST00000461897 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 TGIF2LYQ8IUE0 185 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 NUP37Q8NFH4 326 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM147Q9BVK8 224 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 KCNS2Q9ULS6 477 aa10.35□□□□□ -0.75
COL4A6-204ENST00000461897 TRAV39A0A0B4J263 110 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM8BA6NDV4 472 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 CCL21O00585 134 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 SFTPCP11686 197 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 MDKP21741 143 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-204ENST00000461897 PLA2G5P39877 138 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 BSPH1Q075Z2 132 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 OR2Z1Q8NG97 314 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 OR10D4PQ8NGN7 298 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 LHX4Q969G2 390 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 GPR61Q9BZJ8 451 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 PRDM13Q9H4Q3 707 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 PITPNC1Q9UKF7 332 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 RBM7Q9Y580 266 aaKnown RBP10.34□□□□□ -0.75
COL4A6-204ENST00000461897 UBE2L5PA0A1B0GUS4 154 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 WNT9BO14905 357 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 444.7 ms