RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ST6GALNAC5Q9BVH7 336 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 ZNF256Q9Y2P7 627 aaPredicted RBP6.92□□□□□ -1.3
LDB1-203ENST00000461873 MRPS7Q9Y2R9 242 aaKnown RBP6.92□□□□□ -1.3
LDB1-203ENST00000461873 PRELID3BQ9Y3B1 194 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 A0A0B4J203 849 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 SLC22A5O76082 557 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 DIRAS3O95661 229 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 IGHV3-11P01762 117 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 HSPB1P04792 205 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 LGALS1P09382 135 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 GSTT2P0CG29 244 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 GSTT2BP0CG30 244 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 CD37P11049 281 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 HIST1H1DP16402 221 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 ZP3P21754 424 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 PPIFP30405 207 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 RUNX1Q01196 453 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 PLAC9Q5JTB6 97 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 NR2C2APQ86WQ0 139 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 MINDY2Q8NBR6 621 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 RBMXL1Q96E39 390 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 PRR25Q96S07 402 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 GFI1Q99684 422 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 AGMATQ9BSE5 352 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 FAM103A1Q9BTL3 118 aaKnown RBP6.91□□□□□ -1.3
LDB1-203ENST00000461873 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 KLK15Q9H2R5 256 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 GNB4Q9HAV0 340 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 COA4Q9NYJ1 87 aa6.91□□□□□ -1.3
LDB1-203ENST00000461873 TRBV6-7A0A0A0MS04 114 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 NOTOA8MTQ0 251 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 H3BUA1 57 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 I3L521 148 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 J3QRK9 145 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 AADACP22760 399 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 DTYMKP23919 212 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 ARPC4P59998 168 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 FHL3Q13643 280 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 CDNFQ49AH0 187 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 IGSF11Q5DX21 431 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 IDNKQ5T6J7 187 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 ZNF383Q8NA42 475 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 BVESQ8NE79 360 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 OR5T1Q8NG75 326 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 MCFD2Q8NI22 146 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 ACOT12Q8WYK0 555 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 MAFIPQ8WZ33 124 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 DCUN1D4Q92564 292 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 BCL7BQ9BQE9 202 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 PARP12Q9H0J9 701 aaKnown RBP6.9□□□□□ -1.3
LDB1-203ENST00000461873 RANGRFQ9HD47 186 aaPredicted RBP6.9□□□□□ -1.3
LDB1-203ENST00000461873 SDHAF2Q9NX18 166 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 ZNF230Q9UIE0 474 aaPredicted RBP6.9□□□□□ -1.3
LDB1-203ENST00000461873 DAPK2Q9UIK4 370 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 GAB2Q9UQC2 676 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 NUBP2Q9Y5Y2 271 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 SMAD5-AS1Q9Y6J3 95 aa6.9□□□□□ -1.3
LDB1-203ENST00000461873 FOXI3A8MTJ6 420 aaPredicted RBP6.89□□□□□ -1.31
LDB1-203ENST00000461873 FCN1O00602 326 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 CTDSP2O14595 271 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 TUSC2O75896 110 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 IGKV1-16P04430 117 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 RORCP51449 518 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 SLURP1P55000 103 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 TNXAQ16473 311 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
LDB1-203ENST00000461873 POC5Q8NA72 575 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 OSR1Q8TAX0 266 aaPredicted RBP6.89□□□□□ -1.31
LDB1-203ENST00000461873 CASTOR1Q8WTX7 329 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 AIFM2Q9BRQ8 373 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 CABLES2Q9BTV7 478 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
LDB1-203ENST00000461873 TOLLIPQ9H0E2 274 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 DIABLOQ9NR28 239 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 PTTG2Q9NZH5 202 aa6.89□□□□□ -1.31
LDB1-203ENST00000461873 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 MFNGO00587 321 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 LDLRAD4O15165 306 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 FCGR3BO75015 233 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 CRYZL1O95825 349 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
LDB1-203ENST00000461873 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
LDB1-203ENST00000461873 PLA2G7Q13093 441 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 HACD4Q5VWC8 232 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 KCTD9Q7L273 389 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 SLC25A42Q86VD7 318 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 VSTM2AQ8TAG5 236 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 MYOZ3Q8TDC0 251 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
LDB1-203ENST00000461873 SLC25A46Q96AG3 418 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 CYYR1Q96J86 154 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 TSC22D3Q99576 134 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms