RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 RTL8CO15255 209 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 PROP1O75360 226 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 OR2J3O76001 311 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 SCTP09683 121 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
C9orf78-202ENST00000461349 SNRPGP62308 76 aaKnown RBP9.38□□□□□ -0.91
C9orf78-202ENST00000461349 ATP6AP1Q15904 470 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 C1orf146Q5VVC0 180 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 CYYR1Q96J86 154 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 MAP6D1Q9H9H5 199 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 DMRT1Q9Y5R6 373 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 HSPG2P98160 4391 aa9.38□□□□□ -0.91
C9orf78-202ENST00000461349 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 ACTL6BO94805 426 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 IGFBP3P17936 291 aaPredicted RBP9.37□□□□□ -0.91
C9orf78-202ENST00000461349 VMA21Q3ZAQ7 101 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 CCDC58Q4VC31 144 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 RPL22L1Q6P5R6 122 aaKnown RBP9.37□□□□□ -0.91
C9orf78-202ENST00000461349 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 NR2C2APQ86WQ0 139 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 ZNF575Q86XF7 245 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 C10orf67Q8IYJ2 551 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 MAPKAPK5-AS1Q8N8E1 139 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 SPIN2AQ99865 258 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 SPIN2BQ9BPZ2 258 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 FAAP24Q9BTP7 215 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 OR1A1Q9P1Q5 309 aa9.37□□□□□ -0.91
C9orf78-202ENST00000461349 CREBL2O60519 120 aaPredicted RBP9.36□□□□□ -0.91
C9orf78-202ENST00000461349 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 TAGLNQ01995 201 aaKnown RBP9.36□□□□□ -0.91
C9orf78-202ENST00000461349 PRSS8Q16651 343 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 ZNF585BQ52M93 769 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 TTC9CQ8N5M4 171 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 TEX45Q8NA69 505 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
C9orf78-202ENST00000461349 OR11H2Q8NH07 326 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 PTX4Q96A99 478 aa9.36□□□□□ -0.91
C9orf78-202ENST00000461349 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
C9orf78-202ENST00000461349 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 NAPSAO96009 420 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 IGHV3-23P01764 117 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 HERC1Q15751 4861 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 C6orf201Q7Z4U5 140 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 CDH26Q8IXH8 852 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 OR5B3Q8NH48 314 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 CSTL1Q9H114 145 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 MGAT4AQ9UM21 535 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 POMPQ9Y244 141 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 ZNF257Q9Y2Q1 563 aa9.35□□□□□ -0.91
C9orf78-202ENST00000461349 TRAV8-7A0A075B6U6 113 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 DPPA5A6NC42 116 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 OR4C46A6NHA9 309 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 M0R2N4 97 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 TSPAN4O14817 238 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 C8orf88P0DMB2 117 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 RRASP10301 218 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 MYOD1P15172 320 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 UBE2KP61086 200 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 MED21Q13503 144 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 MRGPRG-AS1Q2M3A8 158 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 Q499Y3 187 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 LAMTOR1Q6IAA8 161 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 IDO2Q6ZQW0 420 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 OR13C5Q8NGS8 318 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 OR4A5Q8NH83 315 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 CD300LFQ8TDQ1 290 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 EEF1AKMT3Q96AZ1 226 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 CCDC140Q96MF4 163 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 RIMS4Q9H426 269 aaPredicted RBP9.34□□□□□ -0.91
C9orf78-202ENST00000461349 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
C9orf78-202ENST00000461349 IGHV4-4A0A075B6R2 117 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
C9orf78-202ENST00000461349 DEFB4AO15263 64 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 CDK2AP2O75956 126 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 P0DMU3 169 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 GALP22466 123 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 ADMP35318 185 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 ELLP55199 621 aaPredicted RBP9.33□□□□□ -0.92
C9orf78-202ENST00000461349 TPBGQ13641 420 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 PVRIGQ6DKI7 326 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 XAF1Q6GPH4 301 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 AMIGO2Q86SJ2 522 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 POM121L12Q8N7R1 296 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 SETD9Q8NE22 299 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 SMIM19Q96E16 107 aa9.33□□□□□ -0.92
C9orf78-202ENST00000461349 ORC6Q9Y5N6 252 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms