RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 OPN1MW3P0DN78 364 aa17.18■□□□□ 0.34
CRAT-207ENST00000458362 NKX6-1P78426 367 aaPredicted RBP17.18■□□□□ 0.34
CRAT-207ENST00000458362 MBNL2Q5VZF2 373 aaKnown RBP17.18■□□□□ 0.34
CRAT-207ENST00000458362 HIST3H2BBQ8N257 126 aa17.18■□□□□ 0.34
CRAT-207ENST00000458362 GPR61Q9BZJ8 451 aa17.18■□□□□ 0.34
CRAT-207ENST00000458362 ACTR3CQ9C0K3 210 aaPredicted RBP17.18■□□□□ 0.34
CRAT-207ENST00000458362 PLSCR4Q9NRQ2 329 aa17.18■□□□□ 0.34
CRAT-207ENST00000458362 S100A2P29034 98 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 IGFL2Q6UWQ7 119 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 OR2Z1Q8NG97 314 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 IGKV1D-17A0A075B6S4 117 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 SEC14L6B5MCN3 397 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 TNFSF13O75888 250 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 MBP02144 154 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 RPL23P62829 140 aaKnown RBP17.17■□□□□ 0.34
CRAT-207ENST00000458362 GNB2P62879 340 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 HTD2P86397 168 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 LRP11Q86VZ4 500 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 Q8N7P7 452 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 OR4F5Q8NH21 305 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 OR4F4Q96R69 305 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 PARLQ9H300 379 aa17.17■□□□□ 0.34
CRAT-207ENST00000458362 A0A1B0GWJ7 208 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 TUBG1P23258 451 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 DUTP33316 252 aaKnown RBP17.16■□□□□ 0.34
CRAT-207ENST00000458362 SPRNQ5BIV9 151 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 OR10D4PQ8NGN7 298 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 Q8TCH9 128 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 ZNF71Q9NQZ8 489 aaPredicted RBP17.16■□□□□ 0.34
CRAT-207ENST00000458362 TUBG2Q9NRH3 451 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 LAMP3Q9UQV4 416 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 TRBV23-1A0A0A0MS06 115 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 TMEM250H0YL14 139 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 ADH4P08319 380 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 GPR12P47775 334 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 BSXQ3C1V8 233 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 ZNF709Q8N972 641 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 NECAP1Q8NC96 275 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 SARAFQ96BY9 339 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 STARD4Q96DR4 205 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 OR6C3Q9NZP0 311 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 DKK4Q9UBT3 224 aa17.16■□□□□ 0.34
CRAT-207ENST00000458362 IGHV3OR15-7A0A075B7D8 119 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 TRAV20A0A0B4J274 112 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 PPP1R2P9O14990 202 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 PAGE4O60829 102 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 FCGR3BO75015 233 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 IGHV3-13P01766 116 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 IGHV3-7P01780 117 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 PFN1P07737 140 aaKnown RBP17.15■□□□□ 0.34
CRAT-207ENST00000458362 PIP4P1Q86T03 277 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 WASF3Q9UPY6 502 aa17.15■□□□□ 0.34
CRAT-207ENST00000458362 TRAV17A0A0B4J275 112 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 CGAP01215 116 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 PAX5Q02548 391 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 BHLHA15Q7RTS1 189 aaPredicted RBP17.14■□□□□ 0.33
CRAT-207ENST00000458362 SSX9Q7RTT3 188 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 FAM234AQ9H0X4 552 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 MANBALQ9NQG1 85 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 RTP5Q14D33 572 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 MORN2Q502X0 79 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 GCSAMLQ5JQS6 135 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 TRAT1Q6PIZ9 186 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 FAM90A1Q86YD7 464 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 ASCL3Q9NQ33 180 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 GNG12Q9UBI6 72 aa17.14■□□□□ 0.33
CRAT-207ENST00000458362 TET2Q6N021 2002 aaPredicted RBP17.14■□□□□ 0.33
CRAT-207ENST00000458362 ELOA3CA0A087WX78 387 aaPredicted RBP17.13■□□□□ 0.33
CRAT-207ENST00000458362 SPAARA0A1B0GVQ0 90 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 SRRM5B3KS81 715 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 RD3LP0DJH9 198 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 RPL39P5Q59GN2 51 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 UTF1Q5T230 341 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 ALKBH2Q6NS38 261 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 VKORC1L1Q8N0U8 176 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 DUSP13Q9UII6 198 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 PROCRQ9UNN8 238 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 M0R1X1 148 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 TGOLN2O43493 480 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 GZMHP20718 246 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 NPPCP23582 126 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 SEM1Q6ZVN7 128 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 DEFB124Q8NES8 71 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 ELOVL1Q9BW60 279 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 WDR83OSQ9Y284 106 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 SLC25A15Q9Y619 301 aa17.13■□□□□ 0.33
CRAT-207ENST00000458362 ZNF134P52741 427 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 OR10A7Q8NGE5 316 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 OR4X1Q8NH49 305 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 MEGF10Q96KG7 1140 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 SNX22Q96L94 193 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 PYGO2Q9BRQ0 406 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 OTOGLQ3ZCN5 2332 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 C17orf112F2Z3M2 114 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 CDC34P49427 236 aaPredicted RBP17.12■□□□□ 0.33
CRAT-207ENST00000458362 AARDQ4LEZ3 155 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 FAM209BQ5JX69 171 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 PRAMEF5Q5TYX0 476 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 GCSAMQ8N6F7 178 aa17.12■□□□□ 0.33
CRAT-207ENST00000458362 ZNF383Q8NA42 475 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms