RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SLC35E4Q6ICL7 350 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 DNM1P46Q6ZS02 220 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SPEM1Q8N4L4 309 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 CCL4L1Q8NHW4 92 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SLC25A2Q9BXI2 301 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF703Q9H7S9 590 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 WFDC1Q9HC57 220 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 DYNLRB1Q9NP97 96 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 HS3ST3B1Q9Y662 390 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ZNFX1Q9P2E3 1918 aaKnown RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 A0A1W2PPC4 97 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 GAGE12BA1L429 117 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 C9JCJ5 164 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 HYPMO75409 117 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 CRYBB3P26998 211 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 WNT5AP41221 380 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 RPL30P62888 115 aaKnown RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 RTP5Q14D33 572 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 DCAF12Q5T6F0 453 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF818PQ6ZRF7 136 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 CALHM1Q8IU99 346 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 OR1N2Q8NGR9 330 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SLC25A40Q8TBP6 338 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 PIMREGQ9BSJ6 248 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 THYN1Q9P016 225 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 MMP17Q9ULZ9 603 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 POLR3KQ9Y2Y1 108 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 LHFPL6Q9Y693 200 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 GREB1LQ9C091 1923 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 COL11A1P12107 1806 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF236Q9UL36 1845 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 A0A096LPE4 126 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 TRAV38-1A0A0B4J264 116 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 A0A1W2PPZ6 126 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 hADV38S2A0JD32 116 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 PGPEP1LA6NFU8 196 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 J3QR06 171 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 CDIPTO14735 213 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 TSPAN2O60636 221 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 LMX1BO60663 402 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SCTP09683 121 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 CKS2P33552 79 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF137PP52743 207 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 RIPPLY3P57055 190 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 IGLV3-21P80748 117 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 MIC13Q5XKP0 118 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 LYG1Q8N1E2 194 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 PRR7Q8TB68 274 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 PATE1Q8WXA2 126 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 SSBP4Q9BWG4 385 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 RTN4RQ9BZR6 473 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 RNF186Q9NXI6 227 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 BTAF1O14981 1849 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 IGHV3-15A0A0B4J1V0 119 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 IGKV1-8A0A0C4DH67 115 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 METTL12A8MUP2 240 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 NPSP0C0P6 89 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 GABRG2P18507 467 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ORM2P19652 201 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 HSPE1P61604 102 aaKnown RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 COL9A2Q14055 689 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM249Q2WGJ8 235 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 LILRA6Q6PI73 481 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 UNQ5815/PRO19632Q6UWF5 114 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 ABHD3Q8WU67 409 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 OR5P3Q8WZ94 311 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 H1FXQ92522 213 aaKnown RBP4.29□□□□□ -1.72
PCDH9-203ENST00000456367 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 GPR35Q9HC97 309 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 PILRAQ9UKJ1 303 aa4.29□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM189A5PLL7 270 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 LMO7DNF2Z398 122 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 PRKNO60260 465 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 LYPD3O95274 346 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 REG1AP05451 166 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 PFN1P07737 140 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 CCL1P22362 96 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TPTE2P1Q5T6R2 138 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 VHLLQ6RSH7 139 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SFTPA2Q8IWL1 248 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 OR1B1Q8NGR6 318 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF48Q96MX3 618 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SCNM1Q9BWG6 230 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 DECR2Q9NUI1 292 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 OR11H12B2RN74 326 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 DLL1O00548 723 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 IGHV3-9P01782 118 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 GPX1P07203 203 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 IL11P20809 199 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TIMP3P35625 211 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SUPT4H1P63272 117 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TMEM177Q53S58 311 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SPINK9Q5DT21 86 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 OR2M3Q8NG83 312 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 OR11H1Q8NG94 326 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 OR11H2Q8NH07 326 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms