RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 RCL1Q9Y2P8 373 aaKnown RBP8.19□□□□□ -1.1
LINC01940-201ENST00000455228 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 VWC2LB2RUY7 222 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 FCN1O00602 326 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 CLDN17P56750 224 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 IL13RA2Q14627 380 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 SLC25A47Q6Q0C1 308 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 GJC3Q8NFK1 279 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 KLHL13Q9P2N7 655 aa8.19□□□□□ -1.1
LINC01940-201ENST00000455228 E9PLN8 166 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 M0QXV9 152 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 EFNA2O43921 213 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 DBHP09172 617 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 HERV-K104P61576 105 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF266Q14584 549 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 TMEM187Q14656 261 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 OR2C3Q8N628 320 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF709Q8N972 641 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 SUMF1Q8NBK3 374 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 OXGR1Q96P68 337 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 REV3LO60673 3130 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 SPRY1O43609 319 aaPredicted RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 GPX1P07203 203 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 GFRA1P56159 465 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 CPEB2Q7Z5Q1 589 aaKnown RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 PLXDC1Q8IUK5 500 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 STARD4Q96DR4 205 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 LYZL4Q96KX0 146 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 TRIB1Q96RU8 372 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 RBM24Q9BX46 236 aaKnown RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 WDR61Q9GZS3 305 aaKnown RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 PNRC2Q9NPJ4 139 aaKnown RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
LINC01940-201ENST00000455228 CSDC2Q9Y534 153 aaKnown RBP8.18□□□□□ -1.1
LINC01940-201ENST00000455228 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 CD55P08174 381 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 FOXL1Q12952 345 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF880Q6PDB4 577 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 C12orf54Q6X4T0 127 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 ZBTB34Q8NCN2 500 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 RCHY1Q96PM5 261 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 NCOA6Q14686 2063 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 CD38P28907 300 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 SPATA31B1PQ5VZV4 182 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 BLNKQ8WV28 456 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 NEU4Q8WWR8 484 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 HSF4Q9ULV5 492 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 FAM24AA6NFZ4 105 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 FOXI3A8MTJ6 420 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 M0R135 149 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 AADACP22760 399 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF83P51522 516 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 EWSR1Q01844 656 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 RSPO4Q2I0M5 234 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 PEAR1Q5VY43 1037 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 SSC4DQ8WTU2 575 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 IL22RA2Q969J5 263 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF799Q96GE5 643 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 Q96M66 194 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 LIME1Q9H400 295 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
LINC01940-201ENST00000455228 LIPGQ9Y5X9 500 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 SHANK1Q9Y566 2161 aa8.17□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF732B4DXR9 585 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 DUX1O43812 170 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SRFP11831 508 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 FAM78BQ5VT40 261 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 Q6ZS52 159 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 THYN1Q9P016 225 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 BRWD1Q9NSI6 2320 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 DIRC3C9JPN6 131 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 WNT2P09544 360 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 CA7P43166 264 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 ARF1P84077 181 aaKnown RBP8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01940-201ENST00000455228 TTC9CQ8N5M4 171 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SPTSSAQ969W0 71 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 HSPB9Q9BQS6 159 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF286AQ9HBT8 521 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 SIGLEC8Q9NYZ4 499 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 HLA-HP01893 362 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 CRYGBP07316 175 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 NKX2-1P43699 371 aaPredicted RBP8.16□□□□□ -1.1
LINC01940-201ENST00000455228 MSMO1Q15800 293 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 GABRA6Q16445 453 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 PIP4P1Q86T03 277 aa8.16□□□□□ -1.1
LINC01940-201ENST00000455228 ZNF695Q8IW36 515 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms