RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TPRX1Q8N7U7 411 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 OR11H6Q8NGC7 330 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 H1FXQ92522 213 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ST6GALNAC6Q969X2 333 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PINX1Q96BK5 328 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 TSNAXQ99598 290 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 CLEC7AQ9BXN2 247 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PARP12Q9H0J9 701 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 FOXA2Q9Y261 457 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 RPS10-NUDT3A0A1W2PQS6 291 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PPIHO43447 177 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 CHST1O43916 411 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 NDUFS6O75380 124 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 SCGB1D2O95969 90 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PPIAL4GP0DN37 164 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF16P17020 682 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 MAS1LP35410 378 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF134P52741 427 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 UBE2KP61086 200 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 GNB2P62879 340 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 RPL30P62888 115 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 EWSR1Q01844 656 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF273Q14593 569 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 NCR3LG1Q68D85 454 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 LYPD2Q6UXB3 125 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 OR8H3Q8N146 312 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 LYG1Q8N1E2 194 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ZCCHC24Q8N2G6 241 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 OR4C13Q8NGP0 309 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 OR1S2Q8NGQ3 325 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 C5orf30Q96GV9 206 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 SSBP3Q9BWW4 388 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PFDN2Q9UHV9 154 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 TIMM9Q9Y5J7 89 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 BSNQ9UPA5 3926 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ATMQ13315 3056 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 LINC00473A8K010 186 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 PROP1O75360 226 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 FOXH1O75593 365 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SPDEFO95238 335 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 IGLV1-47P01700 117 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SELLP14151 372 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 EPHA1P21709 976 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 USF1P22415 310 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 PRTN3P24158 256 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 NFYBP25208 207 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 COMPP49747 757 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 BRWD1-AS2P59051 145 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 MINOS1Q5TGZ0 78 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 PRAMEF5Q5TYX0 476 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 HSD17B13Q7Z5P4 300 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 OR10X1Q8NGY0 326 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 OR5B3Q8NH48 314 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 OR4A16Q8NH70 328 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SRSF8Q9BRL6 282 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 PSMG3Q9BT73 122 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SMDT1Q9H4I9 107 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 DCAF16Q9NXF7 216 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 PRR13Q9NZ81 148 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 WASHC3Q9Y3C0 194 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 MINOS1-NBL1R4GNA1 71 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SMG1Q96Q15 3661 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 USP24Q9UPU5 2620 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 LOC105371242A0A075B767 164 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 IGHV3-43A0A0B4J1X8 118 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 BTBD17A6NE02 478 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 TEX46H3BTG2 121 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 MPDU1O75352 247 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 S1PR2O95136 353 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 NMBP08949 121 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 IGHV3-43DP0DP04 118 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SULT1A2P50226 295 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 CXorf66Q5JRM2 361 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 CCDC144NLQ6NUI1 221 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 TMEM14EPQ6UXP3 125 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 ABHD12Q8N2K0 398 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 C11orf42Q8N5U0 333 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 ATP5SQ99766 215 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 UBTD1Q9HAC8 227 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 SLC35D1Q9NTN3 355 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 TMEM14BQ9NUH8 114 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 FBXL17Q9UF56 701 aa5.59□□□□□ -1.51
ECHDC1-210ENST00000454859 YLPM1P49750 1951 aaKnown RBP5.59□□□□□ -1.52
ECHDC1-210ENST00000454859 DSPP15924 2871 aaKnown RBP5.59□□□□□ -1.52
ECHDC1-210ENST00000454859 MSGN1A6NI15 193 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 SSSCA1O60232 199 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 FCGR3BO75015 233 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 CFDP00746 253 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 KRASP01116 189 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 IFNA5P01569 189 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 IGHV2-5P01817 119 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 TFF1P04155 84 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 CT45A6P0DMU7 189 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 CT45A5P0DMU8 189 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 CT45A7P0DMV0 189 aa5.58□□□□□ -1.52
ECHDC1-210ENST00000454859 SPP1P10451 314 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms