RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SPAG16Q8N0X2 631 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-206ENST00000454852 DRAXINQ8NBI3 349 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-206ENST00000454852 OR4S2Q8NH73 311 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 OSR1Q8TAX0 266 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-206ENST00000454852 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 GLYATL2Q8WU03 294 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 TCTEX1D2Q8WW35 142 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 IL22RA2Q969J5 263 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 TP53RKQ96S44 253 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 PLEKHA2Q9HB19 425 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 SLC35D1Q9NTN3 355 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 COMMD9Q9P000 198 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 SHPKQ9UHJ6 478 aa9.04□□□□□ -0.96
TRAF4-206ENST00000454852 C9orf170A2RU37 121 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 SNRPGP15A8MWD9 76 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 VENTXO95231 258 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
TRAF4-206ENST00000454852 HPRT1P00492 218 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 IFNA2P01563 188 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 OR5AC1P0C628 307 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 OR8H1Q8NGG4 311 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 OR4C13Q8NGP0 309 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 OR51H1Q8NH63 302 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 OR5R1Q8NH85 324 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 MITD1Q8WV92 249 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 CAPSLQ8WWF8 208 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
TRAF4-206ENST00000454852 GPHA2Q96T91 129 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 BEX2Q9BXY8 128 aa9.03□□□□□ -0.96
TRAF4-206ENST00000454852 SOX21Q9Y651 276 aaPredicted RBP9.03□□□□□ -0.96
TRAF4-206ENST00000454852 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
TRAF4-206ENST00000454852 DUXBA0A1W2PPF3 345 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 RAMP3O60896 148 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 FCGR3BO75015 233 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 CRLF1O75462 422 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 SPDEFO95238 335 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 MOSP00540 346 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 HLA-AP01891 365 aaKnown RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 IGKV1-16P04430 117 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 FAM106CPP0CH98 169 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 IER3P46695 156 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 LGALS7P47929 136 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 CBX3Q13185 183 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 C4orf46Q504U0 113 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 LIAT1Q6ZQX7 453 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 IL17RELQ6ZVW7 336 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 NPBQ8NG41 125 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 FLYWCH2Q96CP2 140 aaKnown RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 SSX3Q99909 188 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 AIFM2Q9BRQ8 373 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 GPN1Q9HCN4 374 aaPredicted RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 POMT1Q9Y6A1 747 aa9.02□□□□□ -0.97
TRAF4-206ENST00000454852 SONP18583 2426 aaKnown RBP9.02□□□□□ -0.97
TRAF4-206ENST00000454852 A0A0B4J293 547 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 A6NDX4 124 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 DBX1A6NMT0 343 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 CLDN34H7C241 214 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 IGKV1D-33P01593 117 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 IGKV1-33P01594 117 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 IGKV1-39P01597 117 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 IGKV1D-39P04432 117 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 SERPINE2P07093 398 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 SNRNP70P08621 437 aaKnown RBP9.01□□□□□ -0.97
TRAF4-206ENST00000454852 IL6RP08887 468 aaPredicted RBP9.01□□□□□ -0.97
TRAF4-206ENST00000454852 FGF2P09038 288 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 FAM157CP0CG43 387 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 NQO2P16083 231 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 SRD5A1P18405 259 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 VAMP1P23763 118 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 LPAR6P43657 344 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 TATDN3Q17R31 274 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 C16orf82Q7Z2V1 217 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 LGI3Q8N145 548 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 SSMEM1Q8WWF3 244 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 RBPMSQ93062 196 aaKnown RBP9.01□□□□□ -0.97
TRAF4-206ENST00000454852 PITPNC1Q9UKF7 332 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 TCF19Q9Y242 345 aa9.01□□□□□ -0.97
TRAF4-206ENST00000454852 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 IGHV3-72A0A0B4J1Y9 119 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 MDFIC2A0A1B0GVS7 189 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 H7C2Y5 167 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 CREBL2O60519 120 aaPredicted RBP9□□□□□ -0.97
TRAF4-206ENST00000454852 ATG12O94817 140 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 NDUFA3O95167 84 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 CRYZL1O95825 349 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 HRASP01112 189 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 IGLV2-23P01705 113 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 P0C879 139 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 HLA-GP17693 338 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 PAX6P26367 422 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 RAB25P57735 213 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 UBE2KP61086 200 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 ANKRD55Q3KP44 614 aa9□□□□□ -0.97
TRAF4-206ENST00000454852 SP6Q3SY56 376 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms