RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TCTEX1D1Q8N7M0 179 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 OR5R1Q8NH85 324 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
VPS33A-202ENST00000451053 CAPSLQ8WWF8 208 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 TMEM230Q96A57 120 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 GALNT14Q96FL9 552 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 ADTRPQ96IZ2 230 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 JMJD8Q96S16 334 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 NABP2Q9BQ15 211 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 OR51J1Q9H342 316 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 SDHAF2Q9NX18 166 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 VPREB3Q9UKI3 123 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 A0A0B4J293 547 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 C9orf170A2RU37 121 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 H0Y980 276 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 M0R1X1 148 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 TXNL1O43396 289 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 SFT2D2O95562 160 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
VPS33A-202ENST00000451053 IGLV2-14P01704 120 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 SNRNP70P08621 437 aaKnown RBP10.45□□□□□ -0.74
VPS33A-202ENST00000451053 CT45A6P0DMU7 189 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 CT45A5P0DMU8 189 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 CT45A7P0DMV0 189 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 F2RP25116 425 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 THBS3P49746 956 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 LINC00205P59089 165 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-202ENST00000451053 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 DRAXINQ8NBI3 349 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-202ENST00000451053 COQ8AQ8NI60 647 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 PHB2Q99623 299 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 SEC22CQ9BRL7 303 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 FAM212BQ9NTI7 297 aaPredicted RBP10.45□□□□□ -0.74
VPS33A-202ENST00000451053 TCF19Q9Y242 345 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 MXRA5Q9NR99 2828 aa10.45□□□□□ -0.74
VPS33A-202ENST00000451053 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 A0A0B4J2A0 478 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 A6NDX4 124 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 FAM90A9PA6NNJ1 464 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 TNFSF12O43508 249 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 SSNA1O43805 119 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 CHST1O43916 411 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
VPS33A-202ENST00000451053 KIR2DS2P43631 304 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 TAGLNQ01995 201 aaKnown RBP10.44□□□□□ -0.74
VPS33A-202ENST00000451053 CD300LFQ8TDQ1 290 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 MITD1Q8WV92 249 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 SHPKQ9UHJ6 478 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 PRELID3BQ9Y3B1 194 aa10.44□□□□□ -0.74
VPS33A-202ENST00000451053 TRIM77I1YAP6 450 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 GPR137BO60478 399 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 CD1BP29016 333 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 DUTP33316 252 aaKnown RBP10.43□□□□□ -0.74
VPS33A-202ENST00000451053 RIPPLY3P57055 190 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 SUPT4H1P63272 117 aaKnown RBP10.43□□□□□ -0.74
VPS33A-202ENST00000451053 EIF4EBP1Q13541 118 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-202ENST00000451053 HES1Q14469 280 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 THNSL2Q86YJ6 484 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
VPS33A-202ENST00000451053 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 OR51H1Q8NH63 302 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 CASTOR1Q8WTX7 329 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 TCTEX1D2Q8WW35 142 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 MED28Q9H204 178 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 CUBNO60494 3623 aa10.43□□□□□ -0.74
VPS33A-202ENST00000451053 A0A1B0GVG6 124 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 H0YJW9 148 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 SERPINE2P07093 398 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 OR5AC1P0C628 307 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 FAM106CPP0CH98 169 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 TRAPPC2P0DI81 140 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 TRAPPC2BP0DI82 140 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 RPA2P15927 270 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 TMEM11P17152 192 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 UCP1P25874 307 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 BCAP31P51572 246 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 RRAS2P62070 204 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-202ENST00000451053 EBI3Q14213 229 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 HNF4GQ14541 408 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 LIAT1Q6ZQX7 453 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 LGI3Q8N145 548 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 TAF15Q92804 592 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS33A-202ENST00000451053 IL22RA2Q969J5 263 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 EAF1Q96JC9 268 aaPredicted RBP10.42□□□□□ -0.74
VPS33A-202ENST00000451053 GPHA2Q96T91 129 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 TMEM222Q9H0R3 208 aa10.42□□□□□ -0.74
VPS33A-202ENST00000451053 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 LINC00473A8K010 186 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 RBFOX2O43251 390 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS33A-202ENST00000451053 ATG12O94817 140 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 MOSP00540 346 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 APOA2P02652 100 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 RRASP10301 218 aa10.41□□□□□ -0.74
VPS33A-202ENST00000451053 RPL30P62888 115 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms