RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HLA-BQ31612 363 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 OR8I2Q8N0Y5 310 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 ZNF439Q8NDP4 499 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 OR51H1Q8NH63 302 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 CCL4L1Q8NHW4 92 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 STRADBQ9C0K7 418 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 CLEC5AQ9NY25 188 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 ABI3Q9P2A4 366 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 ERRFI1Q9UJM3 462 aaPredicted RBP7.27□□□□□ -1.24
LSM5-208ENST00000450169 RARRES3Q9UL19 164 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 MMP17Q9ULZ9 603 aa7.27□□□□□ -1.24
LSM5-208ENST00000450169 MUC22E2RYF6 1773 aaPredicted RBP7.27□□□□□ -1.24
LSM5-208ENST00000450169 PSG2P11465 335 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 CTSSP25774 331 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 OTX1P32242 354 aaPredicted RBP7.27□□□□□ -1.25
LSM5-208ENST00000450169 PSG7Q13046 419 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 DCAF12Q5T6F0 453 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 CARD17Q5XLA6 110 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 RD3Q7Z3Z2 195 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 SCCPDHQ8NBX0 429 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 SLC25A40Q8TBP6 338 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 RDH5Q92781 318 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 BMFQ96LC9 184 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 PRDM14Q9GZV8 571 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 OR51B2Q9Y5P1 312 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 DNAH14Q0VDD8 3507 aa7.27□□□□□ -1.25
LSM5-208ENST00000450169 LRP5LA4QPB2 252 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 K7EN84 100 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 M0R296 226 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 BMPR1BO00238 502 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 CDIPTO14735 213 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TUSC2O75896 110 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 MT-CO2P00403 227 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 LINC00869P0C866 280 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 CA7P43166 264 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 SELENOVP59797 346 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 UBE2G1P62253 170 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 PLCXD2Q0VAA5 305 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 KIAA0895LQ68EN5 471 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 UFSP1Q6NVU6 142 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 EBLN2Q6P2I7 272 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TMEM136Q6ZRR5 245 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 GTF2H5Q6ZYL4 71 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OR10G3Q8NGC4 313 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OR8B3Q8NGG8 313 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 LSM10Q969L4 123 aaKnown RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 ZC2HC1AQ96GY0 325 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OR8B2Q96RD0 313 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TMEM147Q9BVK8 224 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 PNO1Q9NRX1 252 aaKnown RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 NOTCH4Q99466 2003 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1-12A0A0C4DH73 117 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 H0Y8X5 98 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 SPINK4O60575 86 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OR7C1O76099 320 aaPredicted RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 IGKV1D-12P01611 117 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 SCTP09683 121 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 NPY1RP25929 384 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OTX2P32243 289 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 GUCA1AP43080 201 aaPredicted RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 PPP1CAP62136 330 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TFF3Q07654 80 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 CNN3Q15417 329 aaKnown RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 TRIP6Q15654 476 aaKnown RBP7.26□□□□□ -1.25
LSM5-208ENST00000450169 PSG3Q16557 428 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 COX19Q49B96 90 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 PHYHD1Q5SRE7 291 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 SLC25A34Q6PIV7 304 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 Q6ZS49 121 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 Q6ZSR3 168 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 OR1E3Q8WZA6 343 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 ATP6V0BQ99437 205 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 PRDM6Q9NQX0 595 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 TMEM38BQ9NVV0 291 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 HRASLS2Q9NWW9 162 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 DEC1Q9P2X7 70 aa7.26□□□□□ -1.25
LSM5-208ENST00000450169 PPIAL4EA0A075B759 164 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 PPIAL4CA0A0B4J2A2 164 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 C7orf71A4D174 169 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 PPIAL4DF5H284 164 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 HSBP1O75506 76 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 CLDN1O95832 211 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 HAND1O96004 215 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 THBDP07204 575 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 PPIAL4FP0DN26 164 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 RBM11P57052 281 aaKnown RBP7.25□□□□□ -1.25
LSM5-208ENST00000450169 CX3CL1P78423 397 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 CST6Q15828 149 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 RSPO4Q2I0M5 234 aaPredicted RBP7.25□□□□□ -1.25
LSM5-208ENST00000450169 PLCXD3Q63HM9 321 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 SLC25A47Q6Q0C1 308 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 NEGR1Q7Z3B1 354 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 UBALD2Q8IYN6 164 aa7.25□□□□□ -1.25
LSM5-208ENST00000450169 BORCS8Q96FH0 119 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms