RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CLCC1Q96S66 551 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 BCL7BQ9BQE9 202 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 EXTL2Q9UBQ6 330 aa11.45□□□□□ -0.58
USP39-206ENST00000448971 RBMX2Q9Y388 322 aaKnown RBP11.45□□□□□ -0.58
USP39-206ENST00000448971 CCDC160A6NGH7 325 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 NUDT19A8MXV4 375 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 SHOXO15266 292 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 CA2P00918 260 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 PPYP01298 95 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 IGF1P05019 195 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 TAS2R46P59540 309 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 HERV-K104P61576 105 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 PSG5Q15238 335 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 RNASE12Q5GAN4 147 aaKnown RBP11.44□□□□□ -0.58
USP39-206ENST00000448971 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
USP39-206ENST00000448971 TEX38Q6PEX7 206 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 TMEM17Q86X19 198 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 ADAM30Q9UKF2 790 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 PRELID3BQ9Y3B1 194 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 A3GALT2U3KPV4 340 aa11.44□□□□□ -0.58
USP39-206ENST00000448971 LINC00473A8K010 186 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 FCGR3BO75015 233 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 CRYZL1O95825 349 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
USP39-206ENST00000448971 RPL23AP62750 156 aaKnown RBP11.43□□□□□ -0.58
USP39-206ENST00000448971 NDPQ00604 133 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 DDB2Q92466 427 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 ISOC1Q96CN7 298 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 SCPEP1Q9HB40 452 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
USP39-206ENST00000448971 TAS2R8Q9NYW2 309 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 CCDC59Q9P031 241 aaKnown RBP11.43□□□□□ -0.58
USP39-206ENST00000448971 ZNF580Q9UK33 172 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 ANAPC10Q9UM13 185 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 WSB1Q9Y6I7 421 aa11.43□□□□□ -0.58
USP39-206ENST00000448971 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 H3BMQ9 156 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 TNFSF12O43508 249 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 PMP2P02689 132 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 HLA-DMAP28067 261 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 RCVRNP35243 200 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 LGALS7P47929 136 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 GNB1P62873 340 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 CX3CL1P78423 397 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 VMA21Q3ZAQ7 101 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 TMEM177Q53S58 311 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 ZNF660Q6AZW8 331 aaPredicted RBP11.42□□□□□ -0.58
USP39-206ENST00000448971 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 GPX8Q8TED1 209 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 HSD17B10Q99714 261 aaKnown RBP11.42□□□□□ -0.58
USP39-206ENST00000448971 ZNF2Q9BSG1 426 aaPredicted RBP11.42□□□□□ -0.58
USP39-206ENST00000448971 DCUN1D5Q9BTE7 237 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 SLC5A7Q9GZV3 580 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 CCL28Q9NRJ3 127 aa11.42□□□□□ -0.58
USP39-206ENST00000448971 A0A1W2PN81 502 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 G3V318 75 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 IGLV2-14P01704 120 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
USP39-206ENST00000448971 ELANEP08246 267 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 HRH1P35367 487 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 CHRNA7P36544 502 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 RFX2P48378 723 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 CFHR3Q02985 330 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 FOXE3Q13461 319 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 ZNF66Q6ZN08 573 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 OVCH2Q7RTZ1 564 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 LAX1Q8IWV1 398 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 OR4S2Q8NH73 311 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 GRPEL2Q8TAA5 225 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 OSR1Q8TAX0 266 aaPredicted RBP11.41□□□□□ -0.58
USP39-206ENST00000448971 DYNC2LI1Q8TCX1 351 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 FAM103A1Q9BTL3 118 aaKnown RBP11.41□□□□□ -0.58
USP39-206ENST00000448971 C6orf62Q9GZU0 229 aaPredicted RBP11.41□□□□□ -0.58
USP39-206ENST00000448971 FBXO7Q9Y3I1 522 aa11.41□□□□□ -0.58
USP39-206ENST00000448971 SULT1C2O00338 296 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 FCN1O00602 326 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 IGHG4P01861 327 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 NAT1P18440 290 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 RPL30P62888 115 aaKnown RBP11.4□□□□□ -0.58
USP39-206ENST00000448971 CATR1Q13166 79 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 DYRK1AQ13627 763 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 VAX1Q5SQQ9 334 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 TMEM65Q6PI78 240 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 C8orf86Q6ZUL3 223 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 GIMAP1Q8WWP7 306 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 BORCS5Q969J3 196 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 ZFP57Q9NU63 452 aa11.4□□□□□ -0.58
USP39-206ENST00000448971 CREBL2O60519 120 aaPredicted RBP11.39□□□□□ -0.59
USP39-206ENST00000448971 CNIH1O95406 144 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 CD33P20138 364 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 TSPAN5P62079 268 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms