RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGLV1-36A0A0B4J1U3 117 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 GCM2O75603 506 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 KRASP01116 189 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 SULT1A3P0DMM9 295 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 SULT1A4P0DMN0 295 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 SNRPBP14678 240 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 NPPCP23582 126 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OPRL1P41146 370 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 DEFB112Q30KQ8 113 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 CALHM1Q8IU99 346 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLEC18CQ8NCF0 446 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10R2Q8NGX6 335 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 LHFPL5Q8TAF8 219 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 NIPSNAP3BQ9BS92 247 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 MRPL13Q9BYD1 178 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV3-49A0A0A0MS15 119 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV4-61A0A0C4DH41 118 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 A0A1B0GW15 77 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 SYNGR1O43759 233 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR13C7P0DN81 318 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 DAD1P61803 113 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF616Q08AN1 781 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 PDZD11Q5EBL8 140 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF324BQ6AW86 544 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 SUMF2Q8NBJ7 301 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 ABCG5Q9H222 651 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 UFC1Q9Y3C8 167 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 NYNRINQ9P2P1 1898 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 M0R1W7 72 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 PTTG1O95997 202 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 MEOX2P50222 304 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 MINOS1Q5TGZ0 78 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 Q6ZN92 141 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 MARC2Q969Z3 335 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 RTN4RQ9BZR6 473 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 VCX2Q9H322 139 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 MINOS1-NBL1R4GNA1 71 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OOSP1A8MZH6 123 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SIAH2O43255 324 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 EFNA2O43921 213 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ORM2P19652 201 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TAS2R20P59543 309 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 HBG1P69891 147 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 HBG2P69892 147 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CYCSP99999 105 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CDK5Q00535 292 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR5P3Q8WZ94 311 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CIB3Q96Q77 187 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 HS3ST6Q96QI5 342 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF2Q9BSG1 426 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ATG2AQ2TAZ0 1938 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRAV39A0A0B4J263 110 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SLC17A2O00624 439 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZFPL1O95159 310 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SULT1A1P50225 295 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GAS1P54826 345 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 DHRS2Q13268 280 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF266Q14584 549 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 AWAT1Q58HT5 328 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAAP24Q9BTP7 215 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 C1QTNF5Q9BXJ0 243 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ISYNA1Q9NPH2 558 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR1A1Q9P1Q5 309 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PSORS1C1Q9UIG5 152 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR4C45A6NMZ5 311 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 LALBAP00709 142 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 APOC3P02656 99 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10J1P30954 320 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 HGFACQ04756 655 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MFGE8Q08431 387 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 VAMP8Q9BV40 100 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 C1QTNF4Q9BXJ3 329 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GABARAPL3Q9BY60 117 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PLEKHA2Q9HB19 425 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 RHOFQ9HBH0 211 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 HELZ2Q9BYK8 2649 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM235A6NFC5 223 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 C17orf112F2Z3M2 114 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GPR31O00270 319 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MOSP00540 346 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SNAI3Q3KNW1 292 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CGB2Q6NT52 195 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MARCH1Q8TCQ1 289 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MBNL3Q9NUK0 354 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 VPREB3Q9UKI3 123 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SETXQ7Z333 2677 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 NDUFB8O95169 186 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 NFYAP23511 347 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 EXOSC2Q13868 293 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GDPD1Q8N9F7 314 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms