RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LINC00311Q8N616 119 aa10.9□□□□□ -0.66
PDLIM2-213ENST00000448520 OR10X1Q8NGY0 326 aa10.9□□□□□ -0.66
PDLIM2-213ENST00000448520 EDARADDQ8WWZ3 215 aa10.9□□□□□ -0.66
PDLIM2-213ENST00000448520 GPR61Q9BZJ8 451 aa10.9□□□□□ -0.66
PDLIM2-213ENST00000448520 LY6LH3BQJ8 138 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 FAM106CPP0CH98 169 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 CD24P25063 80 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 FAUP35544 74 aaKnown RBP10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 IDO2Q6ZQW0 420 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 THNSL2Q86YJ6 484 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 DRAM1Q8N682 238 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 C8orf31Q8N9H6 132 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 MARCH1Q8TCQ1 289 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF251Q9BRH9 671 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 SDHAF2Q9NX18 166 aa10.89□□□□□ -0.67
PDLIM2-213ENST00000448520 K7EIL1 84 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 ITGB1BP1O14713 200 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 TNFSF12O43508 249 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 AMY1AP04745 511 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 PGAM2P15259 253 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 GPR12P47775 334 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 RAB7AP51149 207 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 ASAH1Q13510 395 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 PHLDA2Q53GA4 152 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 DEFB121Q5J5C9 76 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 DRAXINQ8NBI3 349 aaPredicted RBP10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 TERB2Q8NHR7 220 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 ST6GALNAC6Q969X2 333 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 MRPL20Q9BYC9 149 aaKnown RBP10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF221Q9UK13 617 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 VSIG4Q9Y279 399 aa10.88□□□□□ -0.67
PDLIM2-213ENST00000448520 IGHV3-72A0A0B4J1Y9 119 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 M0R1X1 148 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 SPNP16150 400 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 GNRHRP30968 328 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 GLDNQ6ZMI3 551 aaPredicted RBP10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF818PQ6ZRF7 136 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF833PQ6ZTB9 187 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 POC5Q8NA72 575 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 PRRT1Q99946 306 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 SLC2A8Q9NY64 477 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 ZMAT5Q9UDW3 170 aaKnown RBP10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 FLVCR2Q9UPI3 526 aa10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 AMMECR1Q9Y4X0 333 aaPredicted RBP10.87□□□□□ -0.67
PDLIM2-213ENST00000448520 A0A1W2PPI3 338 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 PSMB11A5LHX3 300 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 NAP1L6A6NFF2 107 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 FAM90A9PA6NNJ1 464 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 RAB29O14966 203 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 SLC6A1P30531 599 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF137PP52743 207 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 EGFEM1PQ0D2K5 195 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 KHDC1LQ5JSQ8 128 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 C9orf152Q5JTZ5 239 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF645Q8N7E2 425 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 DPF1Q92782 380 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 RPEQ96AT9 228 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 C7orf50Q9BRJ6 194 aaKnown RBP10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 RSRP1Q9BUV0 290 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 ZFP57Q9NU63 452 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 PIPOXQ9P0Z9 390 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 SCP2D1Q9UJQ7 156 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
PDLIM2-213ENST00000448520 CENPXA8MT69 81 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 NDUFB6O95139 128 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 IL3RAP26951 378 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 UCP3P55916 312 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 RPL30P62888 115 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 EIF4EBP1Q13541 118 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 NRARPQ7Z6K4 114 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 LINC00482Q8N8I6 264 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF383Q8NA42 475 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 ADAD2Q8NCV1 583 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 RTN4IP1Q8WWV3 396 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 DEDD2Q8WXF8 326 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 NABP2Q9BQ15 211 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 RTBDNQ9BSG5 229 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 GPR132Q9UNW8 380 aa10.85□□□□□ -0.67
PDLIM2-213ENST00000448520 TRAV6A0A075B6T7 132 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 WI2-2373I1.2A0A1W2PRP0 233 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 LINC00473A8K010 186 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 CT45A6P0DMU7 189 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 CT45A5P0DMU8 189 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 CT45A7P0DMV0 189 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 ZNF816Q0VGE8 651 aaPredicted RBP10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 C10orf99Q6UWK7 81 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 TMED4Q7Z7H5 227 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 TGIF2LXQ8IUE1 241 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 SLC38A6Q8IZM9 456 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms