RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NAPSAO96009 420 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 SERPINE2P07093 398 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 OTX1P32242 354 aaPredicted RBP16.21■□□□□ 0.19
HMGA1-205ENST00000447654 AMMECR1LQ6DCA0 310 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 FAM58AQ8N1B3 248 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 ST20Q9HBF5 79 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 COPS7AQ9UBW8 275 aa16.21■□□□□ 0.19
HMGA1-205ENST00000447654 FAM90A10PA6NDY2 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A18PA6NE21 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A16PA6NEW6 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A20PA6NIJ5 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A8PA6NJQ4 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A7PA6NKC0 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A22PA8MWA6 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A12PA8MX19 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A5PA8MXJ8 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A23PA8MXZ1 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A15PP0C7V4 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A13PP0C7W8 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A14PP0C7W9 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM90A24PP0C7X0 464 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 PMCHP20382 165 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 IER3P46695 156 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 CDC34P49427 236 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-205ENST00000447654 CCL7P80098 99 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 RPEL1Q2QD12 228 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 FAM69BQ5VUD6 431 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 LYSMD4Q5XG99 296 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 RHBDD2Q6NTF9 364 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 A6NJY4 79 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 M0R1X1 148 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 TBR1Q16650 682 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 BVES-AS1Q5T3Y7 98 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 Q6ZPA2 131 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 ZNF114Q8NC26 417 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 SAP25Q8TEE9 199 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 APOBEC3DQ96AK3 386 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-205ENST00000447654 EMC6Q9BV81 110 aa16.2■□□□□ 0.18
HMGA1-205ENST00000447654 AKIRIN1Q9H9L7 192 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-205ENST00000447654 ANGPTL7O43827 346 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 LINC00869P0C866 280 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 IGLC1P0CG04 106 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 HLA-BQ31612 363 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 DMRTC1Q5HYR2 192 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 OR10G3Q8NGC4 313 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 TMEM204Q9BSN7 226 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 KIR2DS1A0A191URI9 304 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 IAPPP10997 89 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 KIR2DS4P43632 304 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 CLDN17P56750 224 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 RIPPLY3P57055 190 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 SELENOVP59797 346 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 KIR2DS1Q14954 304 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 RNFT1Q5M7Z0 435 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 FER1L6-AS1Q8NA97 138 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 CLEC7AQ9BXN2 247 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 ZNF442Q9H7R0 627 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 CACNG5Q9UF02 275 aa16.19■□□□□ 0.18
HMGA1-205ENST00000447654 IGHV5-10-1A0A0J9YXX1 117 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 OR2T8A6NH00 312 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 HMGB3O15347 200 aaKnown RBP16.18■□□□□ 0.18
HMGA1-205ENST00000447654 IGLL1P15814 213 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 CD1BP29016 333 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 HTD2P86397 168 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 NFAM1Q8NET5 270 aaPredicted RBP16.18■□□□□ 0.18
HMGA1-205ENST00000447654 CCL28Q9NRJ3 127 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 CELSR3Q9NYQ7 3312 aa16.18■□□□□ 0.18
HMGA1-205ENST00000447654 IGLV3-12A0A075B6K2 115 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 SPRY1O43609 319 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-205ENST00000447654 HLA-DRB1P01911 266 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 LGALS7P47929 136 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 REG1BP48304 166 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 SUMO3P55854 103 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-205ENST00000447654 FBXW4P57775 412 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 PSG9Q00887 426 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 SAMD13Q5VXD3 122 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 ANKRD37Q7Z713 158 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 GJC3Q8NFK1 279 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 TSKUQ8WUA8 353 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 NINJ1Q92982 152 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 CLUHP3Q96NS8 147 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 C1RLQ9NZP8 487 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 NAT8BQ9UHF3 227 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 MED12Q93074 2177 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 IGKV1D-13A0A0B4J2D9 117 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 A0A1B0GV72 72 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 GJE1A6NN92 205 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 C9JCJ5 164 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 HLA-DQA1P01909 254 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 IGKV1-13P0DP09 117 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 CDAP32320 146 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 RBM11P57052 281 aaKnown RBP16.17■□□□□ 0.18
HMGA1-205ENST00000447654 TLE1Q04724 770 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 PIGYQ3MUY2 71 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 MPV17L2Q567V2 206 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 PMS2CLQ68D20 193 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 SLC25A40Q8TBP6 338 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 TMEM186Q96B77 213 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 PILRBQ9UKJ0 227 aa16.17■□□□□ 0.18
HMGA1-205ENST00000447654 EXPH5Q8NEV8 1989 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms