RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CIB3Q96Q77 187 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 BCL2L14Q9BZR8 327 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 BEX4Q9NWD9 120 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 KCNIP1Q9NZI2 227 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 GAB2Q9UQC2 676 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CR1P17927 2039 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 MGAM2Q2M2H8 2515 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 OOEPA6NGQ2 149 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 COLCA2A8K830 154 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 KIAA1324LA8MWY0 1029 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 OVOL3O00110 214 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 WRBO00258 174 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 SCGB1D2O95969 90 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 IFNA5P01569 189 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 MBP02144 154 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 RCC1P18754 421 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 DLX1P56177 255 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TNFAIP6P98066 277 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CATR1Q13166 79 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CR1LQ2VPA4 569 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 IGSF11Q5DX21 431 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 MBNL2Q5VZF2 373 aaKnown RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 C11orf71Q6IPW1 123 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF66Q6ZN08 573 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 SLC35E3Q7Z769 313 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CD300LFQ8TDQ1 290 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 ITLN1Q8WWA0 313 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 NINJ1Q92982 152 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 OR2V2Q96R30 315 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TMUB1Q9BVT8 246 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 WFDC1Q9HC57 220 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 PLA2G2EQ9NZK7 142 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 DYSFO75923 2080 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV3OR15-7A0A075B7D8 119 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1-6A0A0C4DH72 117 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 IGSF23A1L1A6 192 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SLC33A1O00400 549 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 ADAM20O43506 726 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 F12P00748 615 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SERPINE2P07093 398 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SCTP09683 121 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 OR8U9P0C7N5 309 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 CD80P33681 288 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 GPR6P46095 362 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PPT1P50897 306 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 HTD2P86397 168 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PDLIM3Q53GG5 364 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 DTX2Q86UW9 622 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 MOGAT3Q86VF5 341 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 OR13D1Q8NGV5 346 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 OR11L1Q8NGX0 322 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 OR8U1Q8NH10 309 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SECTM1Q8WVN6 248 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PIMREGQ9BSJ6 248 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PRR13Q9NZ81 148 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PPP1R3CQ9UQK1 317 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 YLPM1P49750 1951 aaKnown RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 A0A1W2PRD5 423 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 A0A1W2PRF3 423 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 A0A1W2PRM7 423 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 RBFOX3A6NFN3 312 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 C17orf100A8MU93 164 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 C1orf196B1AJZ1 125 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 IFNA1P01562 189 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV1-46P01743 117 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PRH1P02810 166 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 ADH4P08319 380 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 P0C879 139 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 USF1P22415 310 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 ATP6V0CP27449 155 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 NPBWR1P48145 328 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 PDLIM4P50479 330 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 EIF4EBP1Q13541 118 aaPredicted RBP3.94□□□□□ -1.78
EDEM3-203ENST00000439962 SP6Q3SY56 376 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 DNLZQ5SXM8 178 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 AKR1C8PQ5T2L2 129 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 Q6ZR03 302 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 NEK7Q8TDX7 302 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 MS4A5Q9H3V2 200 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 CCL28Q9NRJ3 127 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 FAM96BQ9Y3D0 163 aa3.94□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1D-13A0A0B4J2D9 117 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV1-69-2A0A0G2JMI3 117 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 UBE2CO00762 179 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 RAB29O14966 203 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 RBFOX2O43251 390 aaKnown RBP eCLIP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SYNGR1O43759 233 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SYNGR2O43760 224 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SMIM6P0DI80 62 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1-13P0DP09 117 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 KIR2DS2P43631 304 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 PAX9P55771 341 aa3.93□□□□□ -1.78
EDEM3-203ENST00000439962 RPS23P62266 143 aaKnown RBP3.93□□□□□ -1.78
EDEM3-203ENST00000439962 SRSF3P84103 164 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms