RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR2T10Q8NGZ9 312 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 OR5R1Q8NH85 324 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 TP53RKQ96S44 253 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 SHPKQ9UHJ6 478 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 PITPNC1Q9UKF7 332 aa10.2□□□□□ -0.78
SCLT1-202ENST00000439369 AKAP9Q99996 3911 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 DUXBA0A1W2PPF3 345 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 C7orf66A4D0T2 115 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 H7C2Y5 167 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 FCGR3BO75015 233 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 SPDEFO95238 335 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 CDS2O95674 445 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 MOSP00540 346 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 HRASP01112 189 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 HLA-AP01891 365 aaKnown RBP10.19□□□□□ -0.78
SCLT1-202ENST00000439369 OR5AC1P0C628 307 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 BRWD1-AS2P59051 145 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM187Q14656 261 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 POU2AF1Q16633 256 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 Q6YL49 198 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 BCL6BQ8N143 479 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-202ENST00000439369 LGI3Q8N145 548 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM86BQ8N661 226 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 ZNF431Q8TF32 576 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-202ENST00000439369 GLYATL2Q8WU03 294 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 MITD1Q8WV92 249 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 CAPSLQ8WWF8 208 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 ZDHHC16Q969W1 377 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 FLYWCH2Q96CP2 140 aaKnown RBP10.19□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM56Q96MV1 263 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 GPHA2Q96T91 129 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 GSX1Q9H4S2 264 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-202ENST00000439369 POMT1Q9Y6A1 747 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM56-RWDD3S4R434 201 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
SCLT1-202ENST00000439369 ZANQ9Y493 2812 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 BTBD17A6NE02 478 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 CREBL2O60519 120 aaPredicted RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 SNRNP70P08621 437 aaKnown RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 LPAR6P43657 344 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 IER3P46695 156 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 LINC00205P59089 165 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 ZNF585BQ52M93 769 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 RBMS3Q6XE24 437 aaKnown RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 IL17RELQ6ZVW7 336 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 Q8N6K4 173 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 RBPMSQ93062 196 aaKnown RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 EAF1Q96JC9 268 aaPredicted RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 TSNAXQ99598 290 aaKnown RBP10.18□□□□□ -0.78
SCLT1-202ENST00000439369 PHB2Q99623 299 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 SSX3Q99909 188 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 ACANP16112 2415 aa10.18□□□□□ -0.78
SCLT1-202ENST00000439369 RAMP3O60896 148 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 CRLF1O75462 422 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 CRYZL1O95825 349 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 IGKV1D-33P01593 117 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 IGKV1-33P01594 117 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 IGKV1-16P04430 117 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 FGF2P09038 288 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 FAM157CP0CG43 387 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 NQO2P16083 231 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 RAB25P57735 213 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 SLC9A3R2Q15599 337 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 TATDN3Q17R31 274 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 SP6Q3SY56 376 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 OR2B11Q5JQS5 317 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 FAM219AQ8IW50 185 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 PIFOQ8TCI5 191 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
SCLT1-202ENST00000439369 C1RLQ9NZP8 487 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 TCF19Q9Y242 345 aa10.17□□□□□ -0.78
SCLT1-202ENST00000439369 HIVEP2P31629 2446 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 HIVEP1P15822 2718 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 A0A0A6YYJ9 748 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 IGHV3-72A0A0B4J1Y9 119 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 A6NDX4 124 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 INAFM1C9JVW0 142 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 H3BUX3 64 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 CLDN34H7C241 214 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 M0QZK8 103 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 SHOXO15266 292 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 S1PR2O95136 353 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 TMEM11P17152 192 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 UBE2KP61086 200 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 ERVK-16P61578 105 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 RPS16P62249 146 aaKnown RBP10.16□□□□□ -0.78
SCLT1-202ENST00000439369 HES1Q14469 280 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 ANKRD55Q3KP44 614 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 ZNF695Q8IW36 515 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 NPBQ8NG41 125 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 VSTM2AQ8TAG5 236 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
SCLT1-202ENST00000439369 CASTOR1Q8WTX7 329 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 C22orf15Q8WYQ4 148 aa10.16□□□□□ -0.78
SCLT1-202ENST00000439369 LSM10Q969L4 123 aaKnown RBP10.16□□□□□ -0.78
SCLT1-202ENST00000439369 RHOVQ96L33 236 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms