RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FLOT2Q14254 428 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 TSNQ15631 228 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6AP1Q15904 470 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6V1FQ16864 119 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 C5orf64Q2M2E5 130 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 SMUG1Q53HV7 270 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 SPRNQ5BIV9 151 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 HENMT1Q5T8I9 393 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2G6Q5TZ20 316 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 FRMPD2BQ6IN97 320 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 ANKRD26P1Q6NSI1 321 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 NANOGP8Q6NSW7 305 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAHD1Q6P587 224 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 SCIMPQ6UWF3 145 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 C19orf35Q6ZS72 473 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 LINC00299Q6ZSB3 139 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 PGAP1Q75T13 922 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 SSX6Q7RTT6 188 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM220AQ7Z4H9 259 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 DHFR2Q86XF0 187 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CALHM3Q86XJ0 350 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 STX12Q86Y82 276 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CPNE9Q8IYJ1 553 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 Q8N2B8 174 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDRT4Q8N9R6 151 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 C19orf18Q8NEA5 215 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR52H1Q8NGJ2 320 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR10G9Q8NGN4 311 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR1S2Q8NGQ3 325 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR1N2Q8NGR9 330 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR6K6Q8NGW6 343 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 LYPD6BQ8NI32 183 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 PYDC1Q8WXC3 89 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CHCHD10Q8WYQ3 142 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDS1Q92903 461 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 EXOSC8Q96B26 276 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 APH1AQ96BI3 265 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 RCN3Q96D15 328 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 DGCR14Q96DF8 476 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CMTM7Q96FZ5 175 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 AURKBQ96GD4 344 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 COX14Q96I36 57 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 HBEGFQ99075 208 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CGREF1Q99674 301 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 MICU1Q9BPX6 476 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 C7orf50Q9BRJ6 194 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 RSG1Q9BU20 258 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 RNF126Q9BV68 326 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OSBPL11Q9BXB4 747 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 PCBD2Q9H0N5 130 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 Q9H521 79 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 FGF20Q9NP95 211 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 SPANXB1Q9NS25 103 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 FKBP14Q9NWM8 211 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1orf109Q9NX04 203 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 CCDC167Q9P0B6 97 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 OPTCQ9UBM4 332 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 RCL1Q9Y2P8 373 aaKnown RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 KCNIP3Q9Y2W7 256 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 AP4S1Q9Y587 144 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 V9GYY9 64 aa1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 NUP214P35658 2090 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A087WXM4 84 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 KIR2DS1A0A191URI9 304 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 DHRS12A0PJE2 317 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GJE1A6NN92 205 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 EVPLLA8MZ36 301 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 E5RI56 91 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 LRRN3E7EW58 273 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 H3BNH8 94 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 UPK1AO00322 258 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF593O00488 134 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PPP1R2P9O14990 202 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC31A2O15432 143 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ERI3O43414 337 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SUPT3HO75486 399 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 POP7O75817 140 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SC5DO75845 299 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SEMA3DO95025 777 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TNFAIP8O95379 198 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SOD1P00441 154 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 IGHV2-5P01817 119 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CATP04040 527 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPSAP08865 295 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 IFI6P09912 130 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OCM2P0CE71 109 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1GALT1C1LP0DN25 315 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 HIST1H1CP16403 213 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CRISP2P16562 243 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GGT1P19440 569 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RAB4AP20338 218 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6V1B2P21281 511 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PPIBP23284 216 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 S100A3P33764 101 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARR3P36575 388 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CSNK1A1P48729 337 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GDI2P50395 445 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GPM6AP51674 278 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CEBPGP53567 150 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 UGT2B15P54855 530 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms