RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CASP1P29466 404 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 SRIP30626 198 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TAS2R30P59541 319 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 HSPE1P61604 102 aaKnown RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 HBA1P69905 142 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 ACOT6Q3I5F7 207 aaPredicted RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM69Q5SWH9 247 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 LDLRAD2Q5SZI1 272 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 AKR1C8PQ5T2L2 129 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 FAM24BQ8N5W8 94 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 OR10AD1Q8NGE0 317 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 OR52L1Q8NGH7 329 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 OR5W2Q8NH69 310 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 RXFP4Q8TDU9 374 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 HIST1H2BAQ96A08 127 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM159Q96B96 161 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 DCUN1D1Q96GG9 259 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 SMIM8Q96KF7 97 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 VSIRQ9H7M9 311 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 NOX3Q9HBY0 568 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 DMAC2Q9NW81 257 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 RSL24D1Q9UHA3 163 aaKnown RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 PKIGQ9Y2B9 76 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 POLR1DQ9Y2S0 133 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 HDGFL3Q9Y3E1 203 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 ARID1AO14497 2285 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 DICER1Q9UPY3 1922 aaKnown RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 SETD1AO15047 1707 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF608Q9ULD9 1512 aaPredicted RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 POLA1P09884 1462 aaPredicted RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TCOF1Q13428 1488 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TONSLQ96HA7 1378 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TRAV30A0A087WSZ9 112 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 A0A087WUU8 490 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 IGHV5-51A0A0C4DH38 117 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 A8MWP6 167 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 INS-IGF2F8WCM5 200 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 DNASE2O00115 360 aaPredicted RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 COPEO14579 308 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CCL25O15444 150 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF207O43670 478 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 OR7C2O60412 319 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 SLC25A14O95258 325 aaPredicted RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 IGKV5-2P06315 115 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 DBIP07108 87 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF708P17019 499 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 FGF7P21781 194 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CDK2P24941 298 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 RAB5CP51148 216 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CACNG7P62955 275 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 SELENOWP63302 87 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 SLC35A2P78381 396 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CDK6Q00534 326 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 PRDX1Q06830 199 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ADIGQ0VDE8 80 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 HTR4Q13639 388 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 SCGB2B2Q4G0G5 96 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF684Q5T5D7 378 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 GLYATQ6IB77 296 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 ALKAL1Q6UXT8 129 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 Q6ZSR6 202 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 NAA40Q86UY6 237 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CYB561D1Q8N8Q1 229 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 C11orf72Q8NBR9 251 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 OR5K1Q8NHB7 308 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 MFSD8Q8NHS3 518 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 UBALD1Q8TB05 177 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 OR4K3Q96R72 315 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 HSD17B10Q99714 261 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 SMIM3Q9BZL3 60 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 C20orf27Q9GZN8 174 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 POMKQ9H5K3 350 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 CACYBPQ9HB71 228 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 POPDC3Q9HBV1 291 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 LYRM2Q9NU23 88 aaPredicted RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM100Q9NV29 134 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 MRPL16Q9NX20 251 aaKnown RBP2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 PRNDQ9UKY0 176 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TRAPPC2LQ9UL33 140 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 TNFSF18Q9UNG2 199 aa2.28□□□□□ -2.04
LSM1P1-201ENST00000438629 LRRIQ1Q96JM4 1722 aa2.28□□□□□ -2.05
LSM1P1-201ENST00000438629 HECW2Q9P2P5 1572 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PRDM15P57071 1507 aaPredicted RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ZFYVE16Q7Z3T8 1539 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 FANCAO15360 1455 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ADGRL2O95490 1459 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GRIN2AQ12879 1464 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 TROQ12816 1431 aaPredicted RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RTL1A6NKG5 1358 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ABCC12Q96J65 1359 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 MYH2Q9UKX2 1941 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms