RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 EAF1Q96JC9 268 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-208ENST00000438518 FN1P02751 2386 aaKnown RBP14.75□□□□□ -0.05
HDAC6-208ENST00000438518 CRYM-AS1A6NIL9 109 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 H0Y980 276 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 FCGR3BO75015 233 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 OR2F2O95006 317 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 SPDEFO95238 335 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 PTTG1O95997 202 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 TCRBP04435 133 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 RPA2P15927 270 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 PI3P19957 117 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 LGALS7P47929 136 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 SLC9A3R2Q15599 337 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 SPAG16Q8N0X2 631 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 Q8N6K4 173 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 OR51H1Q8NH63 302 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 RBM14Q96PK6 669 aaKnown RBP14.74□□□□□ -0.05
HDAC6-208ENST00000438518 TSNAXQ99598 290 aaKnown RBP14.74□□□□□ -0.05
HDAC6-208ENST00000438518 C20orf85Q9H1P6 137 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 NAA60Q9H7X0 242 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 PLEKHA2Q9HB19 425 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 KCNIP3Q9Y2W7 256 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 NUBP2Q9Y5Y2 271 aa14.74□□□□□ -0.05
HDAC6-208ENST00000438518 TEX13DA0A0J9YY54 714 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-208ENST00000438518 C3orf85A0A1B0GTC6 90 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 HPRT1P00492 218 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 RNASE1P07998 156 aaKnown RBP14.73□□□□□ -0.05
HDAC6-208ENST00000438518 ANXA3P12429 323 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 TMED4Q7Z7H5 227 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 GALNT14Q96FL9 552 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 COMMD9Q9P000 198 aa14.73□□□□□ -0.05
HDAC6-208ENST00000438518 TRIM77I1YAP6 450 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 FGF16O43320 207 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 HRASP01112 189 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 MECP2P51608 486 aaKnown RBP14.72□□□□□ -0.05
HDAC6-208ENST00000438518 LINC00205P59089 165 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 DHODHQ02127 395 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 SLC25A42Q86VD7 318 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 ZFAND2BQ8WV99 257 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 SLC25A33Q9BSK2 321 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 ALX4Q9H161 411 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-208ENST00000438518 MOB4Q9Y3A3 225 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 ZFHX3Q15911 3703 aa14.72□□□□□ -0.05
HDAC6-208ENST00000438518 SHOXO15266 292 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 ATG12O94817 140 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 NDUFA3O95167 84 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 CRYZL1O95825 349 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 IGKV1-16P04430 117 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 CD24P25063 80 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 RAG2P55895 527 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 RPS16P62249 146 aaKnown RBP14.71□□□□□ -0.05
HDAC6-208ENST00000438518 UBA52P62987 128 aaKnown RBP14.71□□□□□ -0.05
HDAC6-208ENST00000438518 LY6EQ16553 131 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 PLET1Q6UQ28 207 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 NRARPQ7Z6K4 114 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 NPBQ8NG41 125 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 VSTM2AQ8TAG5 236 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 TMEM230Q96A57 120 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 HARBI1Q96MB7 349 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 GPHA2Q96T91 129 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 CHIAQ9BZP6 476 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 ESM1Q9NQ30 184 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 KIAA1456Q9P272 454 aa14.71□□□□□ -0.05
HDAC6-208ENST00000438518 ARPC1BO15143 372 aaKnown RBP14.7□□□□□ -0.06
HDAC6-208ENST00000438518 NBR2O15453 112 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 SERPINE2P07093 398 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 AKR1C4P17516 323 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 UCP1P25874 307 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 BRWD1-AS2P59051 145 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 SRPXP78539 464 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 MMDQ15546 238 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 OR2B11Q5JQS5 317 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 CCBE1Q6UXH8 406 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-208ENST00000438518 CADM3Q8N126 398 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 ADAD2Q8NCV1 583 aaKnown RBP14.7□□□□□ -0.06
HDAC6-208ENST00000438518 NUDT15Q9NV35 164 aa14.7□□□□□ -0.06
HDAC6-208ENST00000438518 GPR137BO60478 399 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 CREBL2O60519 120 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-208ENST00000438518 RAMP3O60896 148 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 H2AFB2P0C5Z0 115 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 NQO2P16083 231 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 HNF4GQ14541 408 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 POU2AF1Q16633 256 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 RGS21Q2M5E4 152 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 VMA21Q3ZAQ7 101 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 LURAP1LQ8IV03 231 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 TP53RKQ96S44 253 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 TMEM222Q9H0R3 208 aa14.69□□□□□ -0.06
HDAC6-208ENST00000438518 RANBP3Q9H6Z4 567 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-208ENST00000438518 MTORP42345 2549 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 PEX14O75381 377 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 OR5AC1P0C628 307 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 UBE2KP61086 200 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 ZNF585BQ52M93 769 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 TMEM219Q86XT9 240 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 IL22RA2Q969J5 263 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 NPFFR1Q9GZQ6 430 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 PLSCR3Q9NRY6 295 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 FLVCR2Q9UPI3 526 aa14.68□□□□□ -0.06
HDAC6-208ENST00000438518 NCBP2LA6PVI3 153 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms