RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGHV3-7P01780 117 aa21.17■□□□□ 0.98
CPNE1-216ENST00000437340 SPANXN5Q5MJ07 72 aa21.17■□□□□ 0.98
CPNE1-216ENST00000437340 ADTRPQ96IZ2 230 aa21.17■□□□□ 0.98
CPNE1-216ENST00000437340 KAAG1Q9UBP8 84 aa21.17■□□□□ 0.98
CPNE1-216ENST00000437340 RNASEK-C17orf49H0YIS7 233 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 LY86O95711 162 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 NFYBP25208 207 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 THBS3P49746 956 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 DVL1P1P54792 670 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-216ENST00000437340 ZNF525Q8N782 197 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 LEAP2Q969E1 77 aa21.16■□□□□ 0.98
CPNE1-216ENST00000437340 PARD6GQ9BYG4 376 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-216ENST00000437340 SAA2-SAA4A0A096LPE2 208 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 NDUFA2O43678 99 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 C1QL1O75973 258 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 OR8U8P0C7N1 319 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 SAA2P0DJI9 122 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 GRNP28799 593 aaKnown RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 FHITP49789 147 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 RPL31P62899 125 aaKnown RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 UTF1Q5T230 341 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 CA5BP1Q8WTZ4 195 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 ZNF251Q9BRH9 671 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 CARHSP1Q9Y2V2 147 aaKnown RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 ZFYVE26Q68DK2 2539 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 NDUFB3O43676 98 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 PRB1P04280 392 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 NQO2P16083 231 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 SNCAP37840 140 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 ERVK-16P61578 105 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 MRPS11P82912 194 aaKnown RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 ARL16Q0P5N6 197 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 LRRC10Q5BKY1 277 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 SLC25A24Q6NUK1 477 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 DPPA3Q6W0C5 159 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 SLC25A48Q6ZT89 311 aaKnown RBP21.15■□□□□ 0.98
CPNE1-216ENST00000437340 HAPLN4Q86UW8 402 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 LFNGQ8NES3 379 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 OR4S2Q8NH73 311 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 DTD1Q8TEA8 209 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 SEC11CQ9BY50 192 aa21.15■□□□□ 0.98
CPNE1-216ENST00000437340 IGHV1-69-2A0A0G2JMI3 117 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 ZG16O60844 167 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 RBMXL2O75526 392 aaKnown RBP21.14■□□□□ 0.97
CPNE1-216ENST00000437340 PLAUP00749 431 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 ADCYAP1P18509 176 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 DEFA5Q01523 94 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 FAM213BQ8TBF2 198 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 SCGB1C1Q8TD33 95 aa21.14■□□□□ 0.97
CPNE1-216ENST00000437340 MS4A7Q9GZW8 240 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-216ENST00000437340 F8W036 122 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 AGPAT2O15120 278 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 DAOP14920 347 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 C4orf17Q53FE4 359 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 PRAMEF5Q5TYX0 476 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 HEPN1Q6WQI6 88 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 C1orf229Q6ZS94 237 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-216ENST00000437340 LYG1Q8N1E2 194 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 SVBPQ8N300 66 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 LILRB2Q8N423 598 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 TMEM231Q9H6L2 316 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 FAM96BQ9Y3D0 163 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 SIAH2O43255 324 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 PPIHO43447 177 aaKnown RBP21.13■□□□□ 0.97
CPNE1-216ENST00000437340 MMP23AO75900 390 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 HCFC1P51610 2035 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 RUNX1Q01196 453 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 ZNF273Q14593 569 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 ZNF672Q499Z4 452 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-216ENST00000437340 MUC15Q8N387 334 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 OR52E5Q8NH55 327 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 ZNF714Q96N38 554 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 HIPK2Q9H2X6 1198 aa21.13■□□□□ 0.97
CPNE1-216ENST00000437340 A0A1W2PPE3 182 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 SCAF4O95104 1147 aaKnown RBP21.12■□□□□ 0.97
CPNE1-216ENST00000437340 OR9G9P0C7N8 305 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 ATP6V1FQ16864 119 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 AKR1C8PQ5T2L2 129 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 TMEM204Q9BSN7 226 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 PSMG3Q9BT73 122 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-216ENST00000437340 ADGRG4Q8IZF6 3080 aa21.12■□□□□ 0.97
CPNE1-216ENST00000437340 FCN3O75636 299 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 SLC38A11Q08AI6 406 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 LRRC75BQ2VPJ9 315 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 HFEQ30201 348 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 PDLIM3Q53GG5 364 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-216ENST00000437340 THNSL2Q86YJ6 484 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 RFNGQ9Y644 331 aa21.11■□□□□ 0.97
CPNE1-216ENST00000437340 BTBD17A6NE02 478 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 CEBPZOSA8MTT3 80 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 FSTL3O95633 263 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 TMEM200BQ69YZ2 307 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 RAB39BQ96DA2 213 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 OR4C12Q96R67 309 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 PKDREJQ9NTG1 2253 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 LOXP28300 417 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-216ENST00000437340 GNG10P50151 68 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 SPCS3P61009 180 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 BTN1A1Q13410 526 aa21.1■□□□□ 0.97
CPNE1-216ENST00000437340 PEA15Q15121 130 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms