RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 CCDC160A6NGH7 325 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 LINC00473A8K010 186 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 ATP6V0E1O15342 81 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 FCGR3BO75015 233 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 TPPPO94811 219 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 CRYZL1O95825 349 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 PMP2P02689 132 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 ELANEP08246 267 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 NAT1P18440 290 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 HLA-DMAP28067 261 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 RCVRNP35243 200 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 FXYD4P59646 89 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 CX3CL1P78423 397 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 FOXE3Q13461 319 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 DYRK1AQ13627 763 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 MSMO1Q15800 293 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 VMA21Q3ZAQ7 101 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 ZNF66Q6ZN08 573 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 OVCH2Q7RTZ1 564 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 ZBTB34Q8NCN2 500 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 OSR1Q8TAX0 266 aaPredicted RBP9□□□□□ -0.97
COL28A1-203ENST00000435823 TCTEX1D2Q8WW35 142 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 DDB2Q92466 427 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 BORCS5Q969J3 196 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 DCUN1D5Q9BTE7 237 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 SLC5A7Q9GZV3 580 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 WSB1Q9Y6I7 421 aa9□□□□□ -0.97
COL28A1-203ENST00000435823 WNK1Q9H4A3 2382 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 VWFP04275 2813 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 TRAV41A0A0B4J266 112 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 NUDT19A8MXV4 375 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 H3BMQ9 156 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 CA2P00918 260 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 IGLV2-14P01704 120 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 PF4P02776 101 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 SLC6A1P30531 599 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 RFX2P48378 723 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 TSPAN5P62079 268 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 RPL23AP62750 156 aaKnown RBP8.99□□□□□ -0.97
COL28A1-203ENST00000435823 CFHR3Q02985 330 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
COL28A1-203ENST00000435823 CATR1Q13166 79 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 ECSCRQ19T08 205 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 ACTBL2Q562R1 376 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 ZNF562Q6V9R5 426 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 TMEM17Q86X19 198 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 MFSD4AQ8N468 514 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 OR4S2Q8NH73 311 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 DYNC2LI1Q8TCX1 351 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 ZNF2Q9BSG1 426 aaPredicted RBP8.99□□□□□ -0.97
COL28A1-203ENST00000435823 TAS2R8Q9NYW2 309 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 CEPT1Q9Y6K0 416 aa8.99□□□□□ -0.97
COL28A1-203ENST00000435823 G3V318 75 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 FCN1O00602 326 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 CTDSP2O14595 271 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 TNFSF12O43508 249 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 CNIH1O95406 144 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 IGLV2-23P01705 113 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 IGHG4P01861 327 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 HRH1P35367 487 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 KIR2DS2P43631 304 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 RPL30P62888 115 aaKnown RBP8.98□□□□□ -0.97
COL28A1-203ENST00000435823 NDPQ00604 133 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 OR2B11Q5JQS5 317 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 TMEM65Q6PI78 240 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 DHRS11Q6UWP2 260 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 LYSMD2Q8IV50 215 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 LAX1Q8IWV1 398 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 TCTEX1D1Q8N7M0 179 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 TEX45Q8NA69 505 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 KLHL30-AS1Q8NEE0 82 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 OR6F1Q8NGZ6 308 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 ARPC1AQ92747 370 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 C6orf62Q9GZU0 229 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-203ENST00000435823 MIXL1Q9H2W2 232 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 TPSG1Q9NRR2 321 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 RABL2AQ9UBK7 228 aaPredicted RBP8.98□□□□□ -0.97
COL28A1-203ENST00000435823 RABL2BQ9UNT1 228 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 A3GALT2U3KPV4 340 aa8.98□□□□□ -0.97
COL28A1-203ENST00000435823 A0A1W2PN81 502 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 CREBL2O60519 120 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 CRYGBP07316 175 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 CD40LGP29965 261 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 CHRNA7P36544 502 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 UBE2KP61086 200 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 GNB1P62873 340 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 MRPS10P82664 201 aaKnown RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 EIF4EBP1Q13541 118 aaPredicted RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 FXYD3Q14802 87 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
COL28A1-203ENST00000435823 UNQ5815/PRO19632Q6UWF5 114 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 ZNF695Q8IW36 515 aa8.97□□□□□ -0.97
COL28A1-203ENST00000435823 OR52I2Q8NH67 350 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms