RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MACROD1Q9BQ69 325 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 WDR13Q9H1Z4 485 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 VCX2Q9H322 139 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 MINOS1-NBL1R4GNA1 71 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 CFAP77Q6ZQR2 320 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PNPLA1Q8N8W4 532 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 NEU4Q8WWR8 484 aaPredicted RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 IL1F10Q8WWZ1 152 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FMC1Q96HJ9 113 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 OR1A1Q9P1Q5 309 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SHISA9B4DS77 424 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SIRPB1O00241 398 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ADAM11O75078 769 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 CD3EP07766 207 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 CXCL3P19876 107 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 OR3A4PP47883 348 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 EWSR1Q01844 656 aaKnown RBP eCLIP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C1orf194Q5T5A4 169 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 HEPN1Q6WQI6 88 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 DMBX1Q8NFW5 382 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C11orf52Q96A22 123 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 CDX2Q99626 313 aaPredicted RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 HES4Q9HCC6 221 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FBXO34Q9NWN3 711 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 RABAC1Q9UI14 185 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 COL6A5A8TX70 2615 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SLC25A17O43808 307 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 RAMP1O60894 148 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ID4P47928 161 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SELENOPP49908 381 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FBXL19-AS1Q494R0 122 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PRSS41Q7RTY9 318 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 GGNQ86UU5 652 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ADAD2Q8NCV1 583 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 BEND2Q8NDZ0 799 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 A0A1W2PS18 150 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ZC3H12DA2A288 527 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SLC25A5P05141 298 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PKIAP61925 76 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 RAB32Q13637 225 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 AWAT1Q58HT5 328 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PCNPQ8WW12 178 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FLYWCH2Q96CP2 140 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FOXQ1Q9C009 403 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PPP1R3CQ9UQK1 317 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C15orf61A6NNL5 157 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PPIHO43447 177 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 HBZP02008 142 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PSG4Q00888 419 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 VWC2Q2TAL6 325 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C1orf185Q5T7R7 199 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 HES3Q5TGS1 186 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 GUSBP11Q6P575 273 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 MEX3BQ6ZN04 569 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ACP7Q6ZNF0 438 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PATE1Q8WXA2 126 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 NARFLQ9H6Q4 476 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 RNF167Q9H6Y7 350 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 STAB2Q8WWQ8 2551 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C17orf51A8MQB3 221 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ADAP1O75689 374 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF735P0CB33 412 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ERVK11-1P61568 191 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM144Q7Z5S9 345 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 WIPF2Q8TF74 440 aaPredicted RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SLC50A1Q9BRV3 221 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 OR2D2Q9H210 308 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 VSIG10L2P0DP72 767 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 SNRPNP63162 240 aaKnown RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 TBC1D26Q86UD7 250 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 RLN3Q8WXF3 142 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF230Q9UIE0 474 aaPredicted RBP3.2□□□□□ -1.9
SHPRH-205ENST00000433355 IGLV3-9A0A075B6K5 115 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 A0A0U1RQS6 177 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 C2orf68Q2NKX9 166 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 PRSS45Q7RTY3 260 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 CNEP1R1Q8N9A8 125 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 FAM222BQ8WU58 562 aa3.2□□□□□ -1.9
SHPRH-205ENST00000433355 A0A1W2PPK0 400 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 RPS10P46783 165 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 FXYD4P59646 89 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 KRTDAPP60985 99 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 KIAA0141Q14154 515 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF750Q32MQ0 723 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LRRC37A5PQ49AS3 106 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 ASPHD2Q6ICH7 369 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TBL2Q9Y4P3 447 aaKnown RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 SIRT4Q9Y6E7 314 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 KMT2BQ9UMN6 2715 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 H3BUA1 57 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 M0QZ24 198 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 STATHP02808 62 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TGFBR1P36897 503 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 FOXD4Q12950 439 aaPredicted RBP3.19□□□□□ -1.9
SHPRH-205ENST00000433355 LURAP1LQ8IV03 231 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 TMEM252Q8N6L7 170 aa3.19□□□□□ -1.9
SHPRH-205ENST00000433355 C18orf12Q96KH6 178 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms