RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 A0A1W2PN81 502 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 R3HDM4Q96D70 268 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 Q96M66 194 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF107Q9UII5 783 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 A6NNC1 897 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 M0R2Z0 102 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 RPL30P62888 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 PSG5Q15238 335 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ZCCHC24Q8N2G6 241 aaKnown RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 NTNG2Q96CW9 530 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 DOCK9Q9BZ29 2069 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF207O43670 478 aaKnown RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ADAP1O75689 374 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 P2RY4P51582 365 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 GAPTQ8N292 157 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 PAQR4Q8N4S7 273 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ZNRF1Q8ND25 227 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 ABHD12Q8N2K0 398 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 OR8A1Q8NGG7 326 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 CXorf58Q96LI9 332 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 A0A1B0GTI1 187 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 MMDQ15546 238 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 LYZL4Q96KX0 146 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 PQLC2LA1A4F0 135 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 WISP1O95388 367 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 SFT2D2O95562 160 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 OR10S1Q8NGN2 331 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 MARVELD3Q96A59 401 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 CLEC7AQ9BXN2 247 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 GLIPR1P48060 266 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 KLF9Q13886 244 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-207ENST00000429896 FAM216BQ8N7L0 139 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 DPRXA6NFQ7 191 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 GCSHP23434 173 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 DTD1Q8TEA8 209 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 HSF4Q9ULV5 492 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 LANCL1O43813 399 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 HPXP02790 462 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 MRPL54Q6P161 138 aaKnown RBP10.92□□□□□ -0.66
PTCH1-207ENST00000429896 PNKDQ8N490 385 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 CHAC2Q8WUX2 184 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 THYN1Q9P016 225 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 PRNTQ86SH4 94 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 OR9G1Q8NH87 305 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 HARBI1Q96MB7 349 aa10.92□□□□□ -0.66
PTCH1-207ENST00000429896 TECRQ9NZ01 308 aaKnown RBP10.92□□□□□ -0.66
PTCH1-207ENST00000429896 LYNX1G3V0Z9 82 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 LYNX1P0DP58 116 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 TMEM241Q24JQ0 296 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 SCGB1D4Q6XE38 83 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 TMED3Q9Y3Q3 217 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 OR1L1Q8NH94 360 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 CCL1P22362 96 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
PTCH1-207ENST00000429896 PPOXP50336 477 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 LY6EQ16553 131 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 HOXA4Q00056 320 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 FOXL2NBQ6ZUU3 175 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 C7orf69Q9H7B7 122 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 TRAV20A0A0B4J274 112 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 B2MP61769 119 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 DHRS2Q13268 280 aa10.91□□□□□ -0.66
PTCH1-207ENST00000429896 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 JPT1Q9UK76 154 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 LOXL3P58215 753 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 CD81P60033 236 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 PITPNC1Q9UKF7 332 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 SLC45A2Q9UMX9 530 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 LRRK1Q38SD2 2015 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 MC5RP33032 325 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 CALHM1Q8IU99 346 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 C9orf62Q8N4C0 152 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 ADAD2Q8NCV1 583 aaKnown RBP10.9□□□□□ -0.66
PTCH1-207ENST00000429896 OR4X1Q8NH49 305 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 SCN8AQ9UQD0 1980 aa10.9□□□□□ -0.66
PTCH1-207ENST00000429896 NINQ8N4C6 2090 aa10.9□□□□□ -0.67
PTCH1-207ENST00000429896 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.67
PTCH1-207ENST00000429896 WDR82Q6UXN9 313 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 TOLLIPQ9H0E2 274 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 WSB1Q9Y6I7 421 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 AREGP15514 252 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 IGSF11Q5DX21 431 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 PCSK4Q6UW60 755 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 OR11H7Q8NGC8 314 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 HLA-DQB1P01920 261 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 SCTP09683 121 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 C3orf36Q3SXR2 165 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 FBXL17Q9UF56 701 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 CHST1O43916 411 aa10.89□□□□□ -0.67
PTCH1-207ENST00000429896 CIDEAO60543 219 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms