RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TOMM20LQ6UXN7 152 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 TNFRSF14Q92956 283 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 SPTSSAQ969W0 71 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 PPP1R14AQ96A00 147 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 SMIM12Q96EX1 92 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 SDSLQ96GA7 329 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 ZNF799Q96GE5 643 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 ZNF319Q9P2F9 582 aa9.61□□□□□ -0.87
CECR3-201ENST00000428828 RCL1Q9Y2P8 373 aaKnown RBP9.61□□□□□ -0.87
CECR3-201ENST00000428828 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 KBTBD11O94819 623 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 CD99P14209 185 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 CRYGSP22914 178 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 ANOS1P23352 680 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 UCP1P25874 307 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 BMI1P35226 326 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 CTRLP40313 264 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 TFPI2P48307 235 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 RPL15P61313 204 aaKnown RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 SRPXP78539 464 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 POM121L2Q96KW2 1035 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 NICN1Q9BSH3 213 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 TMEM59Q9BXS4 323 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 CDC42EP3Q9UKI2 254 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 HELZ2Q9BYK8 2649 aaKnown RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 SOCS1O15524 211 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 XRCC2O43543 280 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 ZNF93P35789 620 aaPredicted RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 ZNF121P58317 390 aaPredicted RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 RHOGP84095 191 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 ARFRP1Q13795 201 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 BATFQ16520 125 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 RSPO1Q2MKA7 263 aaPredicted RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 FAM57BQ71RH2 274 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 STPG4Q8N801 248 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 OR51I2Q9H344 312 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 CRIM1Q9NZV1 1036 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 GNG13Q9P2W3 67 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 LAMTOR2Q9Y2Q5 125 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 MRPS16Q9Y3D3 137 aaKnown RBP9.6□□□□□ -0.87
CECR3-201ENST00000428828 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
CECR3-201ENST00000428828 HRNRQ86YZ3 2850 aaPredicted RBP9.59□□□□□ -0.87
CECR3-201ENST00000428828 VENTXO95231 258 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 IGLV1-44P01699 117 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 CD55P08174 381 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 NBEAP1P0C6P0 100 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 DTYMKP23919 212 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 BSPH1Q075Z2 132 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 FBLN7Q53RD9 439 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 TMEM252Q8N6L7 170 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
CECR3-201ENST00000428828 RNF2Q99496 336 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
CECR3-201ENST00000428828 SLC7A11Q9UPY5 501 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 MRPS28Q9Y2Q9 187 aaKnown RBP9.59□□□□□ -0.87
CECR3-201ENST00000428828 RNF115Q9Y4L5 304 aa9.59□□□□□ -0.87
CECR3-201ENST00000428828 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 C5orf63A6NC05 138 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 RNF212BA8MTL3 300 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 SDCBPO00560 298 aaPredicted RBP9.58□□□□□ -0.88
CECR3-201ENST00000428828 OTX1P32242 354 aaPredicted RBP9.58□□□□□ -0.88
CECR3-201ENST00000428828 WNT5AP41221 380 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 PRSS12P56730 875 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 ERVS71-1P61550 626 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 MPV17LQ2QL34 196 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 SNAI3Q3KNW1 292 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 TMEM108Q6UXF1 575 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 Q6ZWC4 215 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 COMMD2Q86X83 199 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 TMEM171Q8WVE6 324 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 PGAM5Q96HS1 289 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 ARHGAP5-AS1Q96IT6 56 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 SPIN2AQ99865 258 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 SPIN2BQ9BPZ2 258 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 OR10A2Q9H208 303 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 NGBQ9NPG2 151 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 FAM206AQ9NX38 181 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 DPRXA6NFQ7 191 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 CLDN1O95832 211 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 MPIG6BO95866 241 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 CRYAAP02489 173 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 CD40P25942 277 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 UCP3P55916 312 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
CECR3-201ENST00000428828 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
CECR3-201ENST00000428828 SPATA46Q5T0L3 261 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 ZNF787Q6DD87 383 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 MEX3BQ6ZN04 569 aaKnown RBP9.58□□□□□ -0.88
CECR3-201ENST00000428828 PNKDQ8N490 385 aa9.58□□□□□ -0.88
CECR3-201ENST00000428828 OR4C5Q8NGB2 326 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms