RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 KIAA2026Q5HYC2 2103 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 A0A0B4J293 547 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 BTBD17A6NE02 478 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 RBFOX2O43251 390 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 SSNA1O43805 119 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 CREBL2O60519 120 aaPredicted RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 VENTXO95231 258 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 DUS4LO95620 317 aaKnown RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 IL5P05113 134 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 SNRNP70P08621 437 aaKnown RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 RRASP10301 218 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 SRD5A1P18405 259 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 CD24P25063 80 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 UCP1P25874 307 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 MC5RP33032 325 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 LPAR6P43657 344 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 MECP2P51608 486 aaKnown RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 DHODHQ02127 395 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 HNF4GQ14541 408 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 LRRC75BQ2VPJ9 315 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM268Q5VZI3 342 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 LIN54Q6MZP7 749 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 C9orf139Q6ZV77 190 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 TCTEX1D1Q8N7M0 179 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR5AN1Q8NGI8 311 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 COQ8AQ8NI60 647 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 CFHR4Q92496 578 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 FLYWCH2Q96CP2 140 aaKnown RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 RBMXL1Q96E39 390 aaKnown RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 GALNT14Q96FL9 552 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 HARBI1Q96MB7 349 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 ALX4Q9H161 411 aaPredicted RBP6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM160Q9NX00 188 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 ARHGAP32A7KAX9 2087 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 DSCAML1Q8TD84 2053 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 MTORP42345 2549 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 TLN2Q9Y4G6 2542 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 C7orf66A4D0T2 115 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 VGLL3A8MV65 326 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 SNRPGP15A8MWD9 76 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 H3BUX3 64 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 SHOXO15266 292 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 ATG12O94817 140 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 MOSP00540 346 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 IGKV1-16P04430 117 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 FAM106CPP0CH98 169 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 RPA2P15927 270 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM11P17152 192 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 CD1BP29016 333 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 AKR1C2P52895 323 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 RIPPLY3P57055 190 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 HABP2Q14520 560 aaPredicted RBP6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM187Q14656 261 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 ANKRD55Q3KP44 614 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 RBMS3Q6XE24 437 aaKnown RBP6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 LIAT1Q6ZQX7 453 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZNF695Q8IW36 515 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 LGI3Q8N145 548 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 UXS1Q8NBZ7 420 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR4C13Q8NGP0 309 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR2T10Q8NGZ9 312 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 GLYATL2Q8WU03 294 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 MITD1Q8WV92 249 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 PHB2Q99623 299 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 SSX3Q99909 188 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR51J1Q9H342 316 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 PLEKHA2Q9HB19 425 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 TNFRSF19Q9NS68 423 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 ABCA1O95477 2261 aa6.36□□□□□ -1.39
HMGA1P4-201ENST00000428643 A0A0A6YYJ9 748 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 PIGBOS1A0A0B4J2F0 54 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 HPRT1P00492 218 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 HRASP01112 189 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 KRASP01116 189 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 IGHV4-59P01825 116 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 NQO2P16083 231 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 G6PCP35575 357 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 DYNLT3P51808 116 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 BRWD1-AS2P59051 145 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 RPS16P62249 146 aaKnown RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 PLGLAQ15195 96 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 MMDQ15546 238 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 LY6EQ16553 131 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 AANATQ16613 207 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 VMA21Q3ZAQ7 101 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZNF585BQ52M93 769 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM177Q53S58 311 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 Q6ZNX1 250 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 SSX9Q7RTT3 188 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM219Q86XT9 240 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 C12orf45Q8N5I9 185 aaPredicted RBP6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 SIGLECL1Q8N7X8 197 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 SLC35G3Q8N808 338 aa6.35□□□□□ -1.39
HMGA1P4-201ENST00000428643 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms