RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DTD1Q8TEA8 209 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 ACY3Q96HD9 319 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PLSCR4Q9NRQ2 329 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 LIN7CQ9NUP9 197 aaKnown RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 THYN1Q9P016 225 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 MYO15AQ9UKN7 3530 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 TOX4O94842 621 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 EFNA4P52798 201 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 CEACAM21Q3KPI0 293 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 C1QL2Q7Z5L3 287 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 BTF3L4Q96K17 158 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 RARRES2Q99969 163 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 C3orf85A0A1B0GTC6 90 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 G3V3Q6 166 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 TCF21O43680 179 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 IGHG3P01860 377 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 NHLH2Q02577 135 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 NEUROG1Q92886 237 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MISP3Q96FF7 219 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 SERTAD4Q9NUC0 356 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 KIAA2026Q5HYC2 2103 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 FAM106CPP0CH98 169 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 DTYMKP23919 212 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF474Q6S9Z5 364 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM208Q9BTX3 173 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 C2orf16Q68DN1 1984 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 ADAMTS9Q9P2N4 1935 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 A0A1W2PNU3 283 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 IGFBP3P17936 291 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-204ENST00000427724 KRTDAPP60985 99 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MPV17LQ2QL34 196 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 LIAT1Q6ZQX7 453 aa9.04□□□□□ -0.96
TCOF1-204ENST00000427724 MDFIC2A0A1B0GVS7 189 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF735P0CB33 412 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 COX5BP10606 129 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 TAS2R30P59541 319 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 FAM166AQ6J272 317 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 POM121L2Q96KW2 1035 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 Q96MF0 132 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 DHRS7CA6NNS2 312 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 TM4SF5O14894 197 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 VAMP3Q15836 100 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 ADGRG7Q96K78 797 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 RBM14Q96PK6 669 aaKnown RBP9.03□□□□□ -0.96
TCOF1-204ENST00000427724 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 WNT9BO14905 357 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 SRD5A1P18405 259 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF672Q499Z4 452 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-204ENST00000427724 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 KDF1Q8NAX2 398 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-204ENST00000427724 OR10A7Q8NGE5 316 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 GPHA2Q96T91 129 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 GINS3Q9BRX5 216 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 PSENENQ9NZ42 101 aa9.03□□□□□ -0.96
TCOF1-204ENST00000427724 A0A1W2PRX2 142 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF716A6NP11 495 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 EFNA2O43921 213 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 PLAUP00749 431 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 SEC11BP0C7V7 166 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 NTF3P20783 257 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 VDAC1P21796 283 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 GALR1P47211 349 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM50BP56557 158 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 PYY3Q5JQD4 70 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 ACSM6Q6P461 480 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 FAM216BQ8N7L0 139 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 OR2T6Q8NHC8 308 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 FUT9Q9Y231 359 aa9.02□□□□□ -0.96
TCOF1-204ENST00000427724 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 A0A1B0GTI1 187 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 HOXA5P20719 270 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 PMELP40967 661 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 IL13RA2Q14627 380 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 GGNQ86UU5 652 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 PAQR4Q8N4S7 273 aaPredicted RBP9.02□□□□□ -0.97
TCOF1-204ENST00000427724 HARBI1Q96MB7 349 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 AQP10Q96PS8 301 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 A6NNC1 897 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 PPYP01298 95 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 GAPDHP04406 335 aaKnown RBP9.02□□□□□ -0.97
TCOF1-204ENST00000427724 HKR1P10072 659 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 CHRNA7P36544 502 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 ABLIM2Q6H8Q1 611 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms