RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 CEACAM21Q3KPI0 293 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 OR52L2PQ8NGH6 319 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 OR10G8Q8NGN5 311 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 NPCDR1Q9BY65 106 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CHRNA10Q9GZZ6 450 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 MRPL18Q9H0U6 180 aaKnown RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 LPAR2Q9HBW0 351 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 HEYLQ9NQ87 328 aaPredicted RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 NAT8BQ9UHF3 227 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CEP250Q9BV73 2442 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 IGLV3-32A0A0A0MS00 114 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 ODAMA1E959 279 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 C17orf112F2Z3M2 114 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 ETV2O00321 342 aaPredicted RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CDIPTO14735 213 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 RBFOX2O43251 390 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 GGCTO75223 188 aaKnown RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CCL4P13236 92 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 RAB4AP20338 218 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CD82P27701 267 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 Q6ZN92 141 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 Q6ZWC4 215 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 TUSC5Q8IXB3 177 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CADM4Q8NFZ8 388 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 OR1L6Q8NGR2 347 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 FAM216AQ8WUB2 273 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 SFRP2Q96HF1 295 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 DEPPQ9NTK1 212 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 IGHV5-10-1A0A0J9YXX1 117 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 LRP5LA4QPB2 252 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CFIP05156 583 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 RAB7AP51149 207 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 SUMO1P63165 101 aaKnown RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 EDDM3AQ14507 147 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 ASPHD1Q5U4P2 390 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
LINC01108-201ENST00000427276 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.32□□□□□ -1.4
LINC01108-201ENST00000427276 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 IGHEP01854 428 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ARL14EPLP0DKL9 152 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 MGST1P10620 155 aaKnown RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 CHRNB4P30926 498 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 HINT1P49773 126 aaPredicted RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 FXYD3Q14802 87 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 DCAF10Q5QP82 559 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 MIC13Q5XKP0 118 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 MRPL54Q6P161 138 aaKnown RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 WDR74Q6RFH5 385 aaPredicted RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ZNF573Q86YE8 665 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 VKORC1L1Q8N0U8 176 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 FAM19A2Q8N3H0 131 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 MRGPRDQ8TDS7 321 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 STARD4Q96DR4 205 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ZNF391Q9UJN7 358 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ZDBF2Q9HCK1 2354 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 IGLV3-12A0A075B6K2 115 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 C17orf98A8MV24 154 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 M0QZK8 103 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 OR2H2O95918 312 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 RPL30P62888 115 aaKnown RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 GNG3P63215 75 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 AESQ08117 197 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 SPINK14Q6IE38 97 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 OR8I2Q8N0Y5 310 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ST6GALNAC3Q8NDV1 305 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 OCC1Q8TAD7 63 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 APOBEC3DQ96AK3 386 aaPredicted RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 RIMS4Q9H426 269 aaPredicted RBP6.31□□□□□ -1.4
LINC01108-201ENST00000427276 PXMP4Q9Y6I8 212 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 WDFY4Q6ZS81 3184 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 CADP27708 2225 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 NCOR1O75376 2440 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 ARFGEF3Q5TH69 2177 aa6.31□□□□□ -1.4
LINC01108-201ENST00000427276 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
LINC01108-201ENST00000427276 TMEM210A6NLX4 147 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 ZNF716A6NP11 495 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 SH2D1BO14796 132 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 BRS3P32247 399 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 BMI1P35226 326 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 SOX8P57073 446 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 SPATA45Q537H7 98 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 SP5Q6BEB4 398 aaPredicted RBP6.3□□□□□ -1.4
LINC01108-201ENST00000427276 FOXL2NBQ6ZUU3 175 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 LSM10Q969L4 123 aaKnown RBP6.3□□□□□ -1.4
LINC01108-201ENST00000427276 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
LINC01108-201ENST00000427276 PROK2Q9HC23 129 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 ZNF586Q9NXT0 402 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 ELOVL5Q9NYP7 299 aa6.3□□□□□ -1.4
LINC01108-201ENST00000427276 PSG11Q9UQ72 335 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms