RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 AHSA2Q719I0 299 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DEFB125Q8N687 156 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ZNF485Q8NCK3 441 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 OR52B4Q8NGK2 314 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FAM110AQ9BQ89 295 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ST6GALNAC5Q9BVH7 336 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 VCXQ9H320 206 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PLCXD1Q9NUJ7 323 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PSORS1C1Q9UIG5 152 aa9.3□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ZNF320A2RRD8 509 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FABP7O15540 132 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DENRO43583 198 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SLC22A5O76082 557 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DIRAS3O95661 229 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 APELAP0DMC3 54 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FOLR2P14207 255 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 MECP2P51608 486 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PJVKQ0ZLH3 352 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DYRK1AQ13627 763 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ARL6IP1Q15041 203 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 P2RY14Q15391 338 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RAB11BQ15907 218 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RBPMS2Q6ZRY4 209 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LRRTM1Q86UE6 522 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FAM89BQ8N5H3 189 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 VSTM2AQ8TAG5 236 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SRSF12Q8WXF0 261 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 DDB2Q92466 427 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 AIFM2Q9BRQ8 373 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PECRQ9BY49 303 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PARP12Q9H0J9 701 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LPAR5Q9H1C0 372 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 AKIP1Q9NQ31 210 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SDHAF2Q9NX18 166 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 FAM53CQ9NYF3 392 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RAB22AQ9UL26 194 aa9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 MRPS7Q9Y2R9 242 aaKnown RBP9.29□□□□□ -0.92
HLA-DQB3-203ENST00000425319 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ZNF785A8K8V0 405 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 LGALS9O00182 355 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SLC17A2O00624 439 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CYB5BO43169 146 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PROP1O75360 226 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CRYZL1O95825 349 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 IGLV2-23P01705 113 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CRYGBP07316 175 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 CD7P09564 240 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 HIST1H1BP16401 226 aaKnown RBP9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PSMA1P25786 263 aaKnown RBP9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 UNC119Q13432 240 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 SPHARQ15513 63 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 MED22Q15528 200 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 PRSS8Q16651 343 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 TTC9CQ8N5M4 171 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 UFD1Q92890 307 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RAB3CQ96E17 227 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 ARHGAP5-AS1Q96IT6 56 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 HDHD3Q9BSH5 251 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 RETNQ9HD89 108 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
HLA-DQB3-203ENST00000425319 METTL21EPA6NDL7 271 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 PTGES3LE9PB15 166 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CTXN2P0C2S0 81 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 DEFA4P12838 97 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 APOC4P55056 127 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 LINC00205P59089 165 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ARFRP1Q13795 201 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CDK10Q15131 360 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 GPHB5Q86YW7 130 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 FBXL7Q9UJT9 491 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ZNF257Q9Y2Q1 563 aa9.27□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TRAV25A0A0B4J276 109 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 RBMY1BA6NDE4 496 aaKnown RBP9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 RBMY1EA6NEQ0 496 aaKnown RBP9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 BMPR1BO00238 502 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 UBE2CO00762 179 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 PDCD5O14737 125 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR2J3O76001 311 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR2C1O95371 312 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CDK1P06493 297 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 UCHL1P09936 223 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 RBMY1DP0C7P1 496 aaKnown RBP9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CD36P16671 472 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CBLN1P23435 193 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 MAS1LP35410 378 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ARL3P36405 182 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TMEM50BP56557 158 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 QRFPP83859 136 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 C15orf32Q32M92 178 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms