RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TMEM187Q14656 261 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 LY6G6FQ5SQ64 297 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 C8orf31Q8N9H6 132 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 NUP50Q9UKX7 468 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 SSNA1O43805 119 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 SNRNP70P08621 437 aaKnown RBP10.8□□□□□ -0.68
PRPF39-202ENST00000424478 ECI1P42126 302 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF137PP52743 207 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 CFHR4Q92496 578 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 HSD17B10Q99714 261 aaKnown RBP10.8□□□□□ -0.68
PRPF39-202ENST00000424478 GHITMQ9H3K2 345 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 MYOD1P15172 320 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 DHODHQ02127 395 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
PRPF39-202ENST00000424478 FAM25EA8MYX2 175 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 SERPINE2P07093 398 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 CXCL3P19876 107 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 CEACAM3P40198 252 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 F2RL1P55085 397 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 SLC35G3Q8N808 338 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 SSX3Q99909 188 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 TRAV3A0A0B4J244 114 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 FSHBP01225 129 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 IGHV4-59P01825 116 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 RND3P61587 244 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 MIDNQ504T8 468 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 CADM3Q8N126 398 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF431Q8TF32 576 aaPredicted RBP10.79□□□□□ -0.68
PRPF39-202ENST00000424478 TMEM222Q9H0R3 208 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
PRPF39-202ENST00000424478 H3BUX3 64 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 THBS3P49746 956 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 CD300CQ08708 224 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 CATR1Q13166 79 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 OR5AN1Q8NGI8 311 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 CLCC1Q96S66 551 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
PRPF39-202ENST00000424478 H0Y980 276 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 VENTXO95231 258 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 OPN1MWP04001 364 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 OPN1MW2P0DN77 364 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 OPN1MW3P0DN78 364 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 S100GP29377 79 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 TAS2R31P59538 309 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 RPS16P62249 146 aaKnown RBP10.78□□□□□ -0.68
PRPF39-202ENST00000424478 FCN2Q15485 313 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 C11orf87Q6NUJ2 197 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
PRPF39-202ENST00000424478 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 SEC22AQ96IW7 307 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 KCNIP3Q9Y2W7 256 aa10.78□□□□□ -0.68
PRPF39-202ENST00000424478 TET2Q6N021 2002 aaPredicted RBP10.78□□□□□ -0.68
PRPF39-202ENST00000424478 SHOXO15266 292 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 CREBL2O60519 120 aaPredicted RBP10.77□□□□□ -0.68
PRPF39-202ENST00000424478 IGKV1-5P01602 117 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 MECP2P51608 486 aaKnown RBP10.77□□□□□ -0.68
PRPF39-202ENST00000424478 PJVKQ0ZLH3 352 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 SELENOHQ8IZQ5 122 aaKnown RBP10.77□□□□□ -0.68
PRPF39-202ENST00000424478 HARBI1Q96MB7 349 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 PRELID3BQ9Y3B1 194 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 TBL2Q9Y4P3 447 aaKnown RBP10.77□□□□□ -0.68
PRPF39-202ENST00000424478 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.68
PRPF39-202ENST00000424478 C13orf42A0A1B0GVH6 325 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 GOSR2O14653 212 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 SLC22A5O76082 557 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 SPINK9Q5DT21 86 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 ZNF695Q8IW36 515 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 C12orf45Q8N5I9 185 aaPredicted RBP10.77□□□□□ -0.69
PRPF39-202ENST00000424478 ZBTB34Q8NCN2 500 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 PIFOQ8TCI5 191 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 DBX1A6NMT0 343 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 SLC25A17O43808 307 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 DUS4LO95620 317 aaKnown RBP10.77□□□□□ -0.69
PRPF39-202ENST00000424478 APOA2P02652 100 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 UCP1P25874 307 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 AKR1C2P52895 323 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 OR2B8PP59922 312 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 Q6ZRM9 215 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 WASHC3Q9Y3C0 194 aa10.77□□□□□ -0.69
PRPF39-202ENST00000424478 APELAP0DMC3 54 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 SIGLECL1Q8N7X8 197 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 DMBX1Q8NFW5 382 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 OR11H7Q8NGC8 314 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 RNASE11Q8TAA1 199 aaKnown RBP10.76□□□□□ -0.69
PRPF39-202ENST00000424478 MITD1Q8WV92 249 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 GALNT14Q96FL9 552 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
PRPF39-202ENST00000424478 ALX4Q9H161 411 aaPredicted RBP10.76□□□□□ -0.69
PRPF39-202ENST00000424478 GAB2Q9UQC2 676 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 C7orf66A4D0T2 115 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 CDS2O95674 445 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 FBP1P09467 338 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 MINDY2Q8NBR6 621 aa10.76□□□□□ -0.69
PRPF39-202ENST00000424478 CHAC2Q8WUX2 184 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms