RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
CMTM3-202ENST00000424011 GOLT1BQ9Y3E0 138 aa13.81□□□□□ -0.2
CMTM3-202ENST00000424011 A0A087WWC5 75 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 FAM24AA6NFZ4 105 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 SPINT2O43291 252 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 TRGC2P03986 189 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 GZMHP20718 246 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 GLIPR1P48060 266 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 ZNF616Q08AN1 781 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 ST6GALNAC3Q8NDV1 305 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 MAGT1Q9H0U3 335 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 TFF1P04155 84 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 TRGC1P0CF51 173 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 GZMBP10144 247 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 CA7P43166 264 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 ASCL1P50553 236 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 MSMO1Q15800 293 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 SOHLH1Q5JUK2 328 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 ZNF343Q6P1L6 599 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 OR2C3Q8N628 320 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 ZNF645Q8N7E2 425 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 Q8TCH9 128 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 SNHG12Q9BXW3 62 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 GCM1Q9NP62 436 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
CMTM3-202ENST00000424011 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 SSSCA1O60232 199 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 NXPH3O95157 252 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 ADH4P08319 380 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 DANCRP0C864 163 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 IRF2P14316 349 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 TNFRSF1AP19438 455 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 HTD2P86397 168 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 EWSR1Q01844 656 aaKnown RBP eCLIP13.79□□□□□ -0.2
CMTM3-202ENST00000424011 FAM216AQ8WUB2 273 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 PPP1R3CQ9UQK1 317 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 DLEU1O43261 78 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 OR4A8P0C604 315 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 SLC25A6P12236 298 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 HSD17B11Q8NBQ5 300 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
CMTM3-202ENST00000424011 FAM222BQ8WU58 562 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 WFIKKN1Q96NZ8 548 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 ACTR3CQ9C0K3 210 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-202ENST00000424011 NCOR1P1Q9H4R4 102 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 RAB9BQ9NP90 201 aa13.79□□□□□ -0.2
CMTM3-202ENST00000424011 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 IGSF23A1L1A6 192 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 K7N7A8 449 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 CYB5BO43169 146 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 ERVFRD-1P60508 538 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 ID3Q02535 119 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 GAGE1Q13065 139 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 SPRNQ5BIV9 151 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 OR13A1Q8NGR1 328 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 ABHD5Q8WTS1 349 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 GINS3Q9BRX5 216 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 ATRXP46100 2492 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 HEATR1Q9H583 2144 aaKnown RBP13.78□□□□□ -0.2
CMTM3-202ENST00000424011 IGHV3OR15-7A0A075B7D8 119 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 TGIF2-C20orf24A0A0A6YYL0 155 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 A0A1B0GW64 132 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 ODAMA1E959 279 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 CD55P08174 381 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 CAMLGP49069 296 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 OR52L2PQ8NGH6 319 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 SMDT1Q9H4I9 107 aa13.78□□□□□ -0.2
CMTM3-202ENST00000424011 A0A1B0GU03 582 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM50AO95807 157 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 LINC00614P0C842 121 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 TAGLN2P37802 199 aaKnown RBP13.77□□□□□ -0.21
CMTM3-202ENST00000424011 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 FRZBQ92765 325 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 LSM10Q969L4 123 aaKnown RBP13.77□□□□□ -0.21
CMTM3-202ENST00000424011 GPR146Q96CH1 333 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 TMEM208Q9BTX3 173 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 SH3BGRL3Q9H299 93 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 OR6C3Q9NZP0 311 aa13.77□□□□□ -0.21
CMTM3-202ENST00000424011 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 LRRC30A6NM36 301 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 C17orf100A8MU93 164 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 SEC11BP0C7V7 166 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 EPHA1P21709 976 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 SSTR5P35346 364 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 ODF3L1Q8IXM7 274 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 OR2D2Q9H210 308 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-202ENST00000424011 URGCP-MRPS24S4R325 110 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
CMTM3-202ENST00000424011 C15orf65H3BRN8 121 aa13.76□□□□□ -0.21
CMTM3-202ENST00000424011 M0R143 59 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms