RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
USB1-202ENST00000423271 C6orf62Q9GZU0 229 aaPredicted RBP11.82□□□□□ -0.52
USB1-202ENST00000423271 WASHC3Q9Y3C0 194 aa11.82□□□□□ -0.52
USB1-202ENST00000423271 KMT2CQ8NEZ4 4911 aaKnown RBP11.82□□□□□ -0.52
USB1-202ENST00000423271 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 H7C2Y5 167 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 FCN1O00602 326 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 GNB1P62873 340 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 ASPHD1Q5U4P2 390 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 H1FOOQ8IZA3 346 aaPredicted RBP11.81□□□□□ -0.52
USB1-202ENST00000423271 ZNF491Q8N8L2 437 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 ZNF383Q8NA42 475 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 MINDY2Q8NBR6 621 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 MCFD2Q8NI22 146 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 CASTOR1Q8WTX7 329 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 SNAPC3Q92966 411 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 NXF2Q9GZY0 626 aaKnown RBP11.81□□□□□ -0.52
USB1-202ENST00000423271 IFT46Q9NQC8 304 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 ADAM30Q9UKF2 790 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 ANAPC10Q9UM13 185 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 GAB2Q9UQC2 676 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
USB1-202ENST00000423271 I3L521 148 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 SOX15O60248 233 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 IGKV1-16P04430 117 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 CTXN2P0C2S0 81 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 OR8U9P0C7N5 309 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 NFYAP23511 347 aaPredicted RBP11.8□□□□□ -0.52
USB1-202ENST00000423271 MC5RP33032 325 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 ARPC4P59998 168 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 CX3CL1P78423 397 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 DGCR2P98153 550 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 PLGLAQ15195 96 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 GHITMQ9H3K2 345 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
USB1-202ENST00000423271 A0A1W2PN81 502 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 RBBP9O75884 186 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 EGR2P11161 476 aaPredicted RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 CHRNA7P36544 502 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 RAB9AP51151 201 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 PSG5Q15238 335 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 RNASE12Q5GAN4 147 aaKnown RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 C9orf66Q5T8R8 295 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 ZNF660Q6AZW8 331 aaPredicted RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 FAM103A1Q9BTL3 118 aaKnown RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 ALX4Q9H161 411 aaPredicted RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 OR2D2Q9H210 308 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 SCPEP1Q9HB40 452 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 NDUFA13Q9P0J0 144 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
USB1-202ENST00000423271 ZNF221Q9UK13 617 aa11.79□□□□□ -0.52
USB1-202ENST00000423271 J3QRK9 145 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 M0R1X1 148 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 NAT1P18440 290 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 RUNX1Q01196 453 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 CDK10Q15131 360 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 DIRAS2Q96HU8 199 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 PRR25Q96S07 402 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 ABHD1Q96SE0 405 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
USB1-202ENST00000423271 OR2W1Q9Y3N9 320 aa11.78□□□□□ -0.52
USB1-202ENST00000423271 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
USB1-202ENST00000423271 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 SULT1C2O00338 296 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 TUSC2O75896 110 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 TPPPO94811 219 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 CA2P00918 260 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.53
USB1-202ENST00000423271 ZNF616Q08AN1 781 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 PPP1R27Q86WC6 154 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 OR52I2Q8NH67 350 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 DGCR14Q96DF8 476 aaKnown RBP11.77□□□□□ -0.53
USB1-202ENST00000423271 RNF5Q99942 180 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 B9D2Q9BPU9 175 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 SDHAF2Q9NX18 166 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 NUBP2Q9Y5Y2 271 aa11.77□□□□□ -0.53
USB1-202ENST00000423271 APOA2P02652 100 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 PMP2P02689 132 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 AADACP22760 399 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 HLA-DMAP28067 261 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 FCGR2CP31995 323 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 TNFSF8P32971 234 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 ECI1P42126 302 aa11.76□□□□□ -0.53
USB1-202ENST00000423271 CD69Q07108 199 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms