RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GSTT2P0CG29 244 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 GSTT2BP0CG30 244 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 CD37P11049 281 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 MAPK3P27361 379 aaPredicted RBP6.11□□□□□ -1.43
VIM-202ENST00000421459 LGALS7P47929 136 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 HSD17B12Q53GQ0 312 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 C10orf55Q5SWW7 151 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 MOB1BQ7L9L4 216 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 FAM89BQ8N5H3 189 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 ADAD2Q8NCV1 583 aaKnown RBP6.11□□□□□ -1.43
VIM-202ENST00000421459 EDARADDQ8WWZ3 215 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 WDR89Q96FK6 387 aaPredicted RBP6.11□□□□□ -1.43
VIM-202ENST00000421459 HARBI1Q96MB7 349 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 CMSS1Q9BQ75 279 aaKnown RBP6.11□□□□□ -1.43
VIM-202ENST00000421459 OR2D2Q9H210 308 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 AKIP1Q9NQ31 210 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 ZNF230Q9UIE0 474 aaPredicted RBP6.11□□□□□ -1.43
VIM-202ENST00000421459 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 TRDCB7Z8K6 153 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 SHOXO15266 292 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 TPPPO94811 219 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 IGHV3-23P01764 117 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 UCHL1P09936 223 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 AADACP22760 399 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 RHOGP84095 191 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 EWSR1Q01844 656 aaKnown RBP eCLIP6.1□□□□□ -1.43
VIM-202ENST00000421459 EXOSC2Q13868 293 aaKnown RBP6.1□□□□□ -1.43
VIM-202ENST00000421459 TNXAQ16473 311 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 GUCA2BQ16661 112 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 TATDN3Q17R31 274 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 MOGAT2Q3SYC2 334 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 RNLSQ5VYX0 342 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 TMEM91Q6ZNR0 172 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 SETD9Q8NE22 299 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 CACNG8Q8WXS5 425 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 PHYHIPQ92561 330 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 RIMS4Q9H426 269 aaPredicted RBP6.1□□□□□ -1.43
VIM-202ENST00000421459 SRD5A3Q9H8P0 318 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 C12orf4Q9NQ89 552 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 FKBP14Q9NWM8 211 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 SIGLEC8Q9NYZ4 499 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 KCNK7Q9Y2U2 307 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 S4R3C0 116 aa6.1□□□□□ -1.43
VIM-202ENST00000421459 HMX3A6NHT5 357 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 LINC00473A8K010 186 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 PTGES3LE9PB15 166 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 FABP7O15540 132 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 OR2J3O76001 311 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 OR2A4O95047 310 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 OR2C1O95371 312 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 OR9G9P0C7N8 305 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 FOLR2P14207 255 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 RPS25P62851 125 aaKnown RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 ATP5G2Q06055 141 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 PRSS8Q16651 343 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 C2orf76Q3KRA6 126 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 TMEM177Q53S58 311 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 LIPKQ5VXJ0 399 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 C8orf59Q8N0T1 100 aaPredicted RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 VKORC1L1Q8N0U8 176 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 MS4A15Q8N5U1 240 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 OR6M1Q8NGM8 313 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 SRSF12Q8WXF0 261 aaKnown RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 ACOT12Q8WYK0 555 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 SNAPC3Q92966 411 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 USMG5Q96IX5 58 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 CNBD2Q96M20 576 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 URM1Q9BTM9 101 aaKnown RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 YTHDF1Q9BYJ9 559 aaKnown RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 PLGRKTQ9HBL7 147 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 PLCXD1Q9NUJ7 323 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 ELF5Q9UKW6 265 aaPredicted RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 HSF4Q9ULV5 492 aa6.09□□□□□ -1.43
VIM-202ENST00000421459 LSM2Q9Y333 95 aaKnown RBP6.09□□□□□ -1.43
VIM-202ENST00000421459 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.44
VIM-202ENST00000421459 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 A0A075B6Q4 140 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 IGKV1D-8A0A087WSZ0 117 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 TRBV6-7A0A0A0MS04 114 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 TRBV9A0A0B4J1U6 114 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 A0A0B4J203 849 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 TMEM272A0A1B0GTI8 110 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 C2orf70A6NJV1 201 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 E7EUB6 86 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 SLC17A2O00624 439 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 MPPED1O15442 326 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 CRYZL1O95825 349 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 LY6G6CO95867 125 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 CDK1P06493 297 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 GNB3P16520 340 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 UBE2KP61086 200 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 SPHARQ15513 63 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 MED22Q15528 200 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 RAB11BQ15907 218 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 KCTD21Q4G0X4 260 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 OR2B11Q5JQS5 317 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 HES5Q5TA89 166 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms