RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 A0A0G2JLM5 398 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 MSGN1A6NI15 193 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 ITGB1BP1O14713 200 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 ZBTB25P24278 435 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 MAP2K4P45985 399 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 TMEM50BP56557 158 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 PLAC9Q5JTB6 97 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 MOB1BQ7L9L4 216 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 PTX4Q96A99 478 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 ARHGAP5-AS1Q96IT6 56 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 HARBI1Q96MB7 349 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 CCDC90BQ9GZT6 254 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 ACOT13Q9NPJ3 140 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 AKIP1Q9NQ31 210 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 GHRLQ9UBU3 117 aa9.69□□□□□ -0.86
LINC00339-203ENST00000420503 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-203ENST00000420503 OR2A4O95047 310 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 APOA2P02652 100 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 CLDN12P56749 244 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 RHOGP84095 191 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 MLLT11Q13015 90 aaPredicted RBP9.68□□□□□ -0.86
LINC00339-203ENST00000420503 TPBGQ13641 420 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 PMS2P11Q13670 270 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 EXOSC2Q13868 293 aaKnown RBP9.68□□□□□ -0.86
LINC00339-203ENST00000420503 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 SPARTQ8N0X7 666 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 SDHAF2Q9NX18 166 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 SIGLEC8Q9NYZ4 499 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 ZNF221Q9UK13 617 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 S4R3C0 116 aa9.68□□□□□ -0.86
LINC00339-203ENST00000420503 TPPPO94811 219 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 LY6G6CO95867 125 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 UBBP0CG47 229 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 GUCA2BQ16661 112 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 MOGAT2Q3SYC2 334 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 KCTD21Q4G0X4 260 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 LIPKQ5VXJ0 399 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 PHB2Q99623 299 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 MGLLQ99685 303 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 PECRQ9BY49 303 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 C12orf4Q9NQ89 552 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 KCNK7Q9Y2U2 307 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
LINC00339-203ENST00000420503 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 BET1O15155 118 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 AADACP22760 399 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 LGALS7P47929 136 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 TNXAQ16473 311 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 UBE2UQ5VVX9 321 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 GLT8D1Q68CQ7 371 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 ZNF773Q6PK81 442 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 ZNF367Q7RTV3 350 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 CEACAM19Q7Z692 300 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 FAM89BQ8N5H3 189 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
LINC00339-203ENST00000420503 MS4A15Q8N5U1 240 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 SRSF12Q8WXF0 261 aaKnown RBP9.66□□□□□ -0.86
LINC00339-203ENST00000420503 UFD1Q92890 307 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
LINC00339-203ENST00000420503 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 LINC00473A8K010 186 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 TRDCB7Z8K6 153 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 SHOXO15266 292 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 OR2J3O76001 311 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 OR2C1O95371 312 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 BPNT1O95861 308 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 OR9G9P0C7N8 305 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 GSTT2P0CG29 244 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 GSTT2BP0CG30 244 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 HSMCR30P0CW71 290 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 CD37P11049 281 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 FOLR2P14207 255 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 SRMP19623 302 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 MAPK3P27361 379 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-203ENST00000420503 SSX1Q16384 188 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 PRSS8Q16651 343 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 TMEM177Q53S58 311 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 ACOT12Q8WYK0 555 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 THRSPQ92748 146 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 SNAPC3Q92966 411 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 CMSS1Q9BQ75 279 aaKnown RBP9.65□□□□□ -0.86
LINC00339-203ENST00000420503 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
LINC00339-203ENST00000420503 AK6Q9Y3D8 172 aaKnown RBP9.65□□□□□ -0.86
LINC00339-203ENST00000420503 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.87
LINC00339-203ENST00000420503 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
LINC00339-203ENST00000420503 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
LINC00339-203ENST00000420503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.64□□□□□ -0.87
LINC00339-203ENST00000420503 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms