RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CACNA1EQ15878 2313 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 H0Y980 276 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 FOXD3Q9UJU5 478 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-205ENST00000418258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.65□□□□□ -0.86
PTCH1-205ENST00000418258 ISG15P05161 165 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 SELENOTP62341 195 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 GEMIN7Q9H840 131 aaKnown RBP9.65□□□□□ -0.86
PTCH1-205ENST00000418258 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 HSF4Q9ULV5 492 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 ASAH2BP0C7U1 165 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 ANOS1P23352 680 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 EFNB2P52799 333 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 VKORC1L1Q8N0U8 176 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 VN1R17PQ8TDU5 208 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.86
PTCH1-205ENST00000418258 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 A6NJY4 79 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 TRGV3P03979 118 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 PRSS2P07478 247 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 DNM1P46Q6ZS02 220 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 ITLN2Q8WWU7 325 aaPredicted RBP9.65□□□□□ -0.87
PTCH1-205ENST00000418258 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 LOC285556D6RIA3 1793 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 IGKV1-8A0A0C4DH67 115 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 VSIG10L2P0DP72 767 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 HOXB1P14653 301 aaPredicted RBP9.65□□□□□ -0.87
PTCH1-205ENST00000418258 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.87
PTCH1-205ENST00000418258 FXYD3Q14802 87 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 RGP1Q92546 391 aaPredicted RBP9.65□□□□□ -0.87
PTCH1-205ENST00000418258 GBF1Q92538 1859 aa9.65□□□□□ -0.87
PTCH1-205ENST00000418258 KBTBD11O94819 623 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 CEACAM1P13688 526 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 C2orf83Q53S99 150 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 SRXN1Q9BYN0 137 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 PGPA6NDG6 321 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 H3BQ15 152 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 CXCL3P19876 107 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 HOXA6P31267 233 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 CSRP2Q16527 193 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 ZNF256Q9Y2P7 627 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-205ENST00000418258 DXOO77932 396 aaKnown RBP9.64□□□□□ -0.87
PTCH1-205ENST00000418258 COX6CP09669 75 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 LRRK1Q38SD2 2015 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 GPR82Q96P67 336 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 NGFRP08138 427 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
PTCH1-205ENST00000418258 OR4A47Q6IF82 309 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 RAB24Q969Q5 203 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 RHOVQ96L33 236 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-205ENST00000418258 KCNK7Q9Y2U2 307 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 DSPPQ9NZW4 1301 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-23P01764 117 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 GVINP1Q7Z2Y8 2422 aa9.64□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-48P01763 117 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 EMP1P54849 157 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 LHFPL5Q8TAF8 219 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 GDF9O60383 454 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 HTN3P15516 51 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 IGF2P01344 180 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 ST6GAL2Q96JF0 529 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 CFHR5Q9BXR6 569 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 KLK15Q9H2R5 256 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 PTP4A3O75365 173 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 RND2P52198 227 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-205ENST00000418258 NEU1Q99519 415 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 ARFGEF3Q5TH69 2177 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 NPIPB11E5RHQ5 1161 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 RCC1P18754 421 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-205ENST00000418258 OR9G1Q8NH87 305 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 SGMS2Q8NHU3 365 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 DOCK4Q8N1I0 1966 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 PCNX1Q96RV3 2341 aa9.63□□□□□ -0.87
PTCH1-205ENST00000418258 CA2P00918 260 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 CD74P04233 296 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 PTGDSP41222 190 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 NANOS3P60323 173 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 HIST1H1AQ02539 215 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 DNAJC4Q9NNZ3 241 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 PSMB11A5LHX3 300 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 NDUFB4O95168 129 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 LGALS3P17931 250 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 NCMAPQ5T1S8 102 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms