RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ACOT12Q8WYK0 555 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 DIRAS2Q96HU8 199 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 PGLYRP3Q96LB9 341 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 NOL4LQ96MY1 436 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-204ENST00000415749 TEAD3Q99594 435 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 SLC22A4Q9H015 551 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 SLC35A3Q9Y2D2 325 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 NOTCH3Q9UM47 2321 aa4.63□□□□□ -1.67
EPHA4-204ENST00000415749 IGKV1D-8A0A087WSZ0 117 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 A0A087WYN8 130 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 IGHV2OR16-5A0A0B4J2B6 119 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 A0A1B0GWA3 101 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 FAM183AA6NL82 134 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 CENPXA8MT69 81 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 IDH3BO43837 385 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 NDUFS6O75380 124 aaKnown RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 IGF2P01344 180 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 IGKV3-15P01624 115 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 AMBPP02760 352 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ACSM4P0C7M7 580 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 NQO2P16083 231 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ELK1P19419 428 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 MYL9P24844 172 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 BTCP35070 178 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RCVRNP35243 200 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 NKX2-5P52952 324 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ATP12AP54707 1039 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RPS11P62280 158 aaKnown RBP eCLIP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 H3F3AP84243 136 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RPEL1Q2QD12 228 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 NDUFAF6Q330K2 333 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 YIF1BQ5BJH7 314 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 Q5BKY6 102 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF684Q5T5D7 378 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RSBN1Q5VWQ0 802 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 SSX6Q7RTT6 188 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 AAED1Q7RTV5 226 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ABHD12BQ7Z5M8 362 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 OAFQ86UD1 273 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF329Q86UD4 541 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 SELENOHQ8IZQ5 122 aaKnown RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 TCTE3Q8IZS6 198 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 LINC00469Q8N7U9 141 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 COX18Q8N8Q8 333 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 Q8NBF4 154 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 TMEM234Q8WY98 164 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 MRGPRFQ96AM1 343 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 POM121L2Q96KW2 1035 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 PGLYRP4Q96LB8 373 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 OR5B12Q96R08 314 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 MARVELD1Q9BSK0 173 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 CHCHD5Q9BSY4 110 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 TMED9Q9BVK6 235 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 NDEL1Q9GZM8 345 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 MMP26Q9NRE1 261 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RBFOX1Q9NWB1 397 aaKnown RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 RCL1Q9Y2P8 373 aaKnown RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 MED31Q9Y3C7 131 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 HDGFL3Q9Y3E1 203 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 FLVCR1Q9Y5Y0 555 aa4.62□□□□□ -1.67
EPHA4-204ENST00000415749 SOX21Q9Y651 276 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-204ENST00000415749 A0A087WUJ7 227 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 TRAV1-2A0A0B4J238 106 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 DAPL1A0PJW8 107 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 C5orf63A6NC05 138 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 LYRM1O43325 122 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 EIF1BO60739 113 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 FOXH1O75593 365 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 RENP00797 406 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 EIF4EP06730 217 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 VDAC1P21796 283 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 FKBP2P26885 142 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 SLC6A1P30531 599 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 GLRXP35754 106 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 KCNJ3P48549 501 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR12D2P58182 307 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 TAS2R43P59537 309 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ACTA2P62736 377 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ACTG2P63267 376 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ACTC1P68032 377 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ACTA1P68133 377 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ECH1Q13011 328 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 CDK10Q15131 360 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 SLC36A2Q495M3 483 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 PYDC2Q56P42 97 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 LINC01590Q5TEZ4 76 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 Q6ZN92 141 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 SLC35D2Q76EJ3 337 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 MYPOPQ86VE0 399 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 LRP11Q86VZ4 500 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 LRRC28Q86X40 367 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 SLC7A5P1Q8MH63 180 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 PUSL1Q8N0Z8 303 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 SYS1Q8N2H4 156 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 Q8N402 240 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF614Q8N883 585 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms