RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 OR5H6Q8NGV6 325 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 PRSS3P2Q8NHM4 247 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 DDB2Q92466 427 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 RPEQ96AT9 228 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 YIPF6Q96EC8 236 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 KCTD7Q96MP8 289 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 SLC25A33Q9BSK2 321 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 NAA50Q9GZZ1 169 aaKnown RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 PARP12Q9H0J9 701 aaKnown RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 ATG5Q9H1Y0 275 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 NCOR1P1Q9H4R4 102 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 ZNF696Q9H7X3 374 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 BEX1Q9HBH7 125 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 VCX3AQ9NNX9 186 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 OR2S2Q9NQN1 319 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 KCNIP1Q9NZI2 227 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 OR1A1Q9P1Q5 309 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 ZNF230Q9UIE0 474 aaPredicted RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 RAB22AQ9UL26 194 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 KCNK7Q9Y2U2 307 aa3.88□□□□□ -1.79
VPS41-205ENST00000414632 AMMECR1Q9Y4X0 333 aaPredicted RBP3.88□□□□□ -1.79
VPS41-205ENST00000414632 IGHV1-3A0A0C4DH29 117 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 FAM90A26D6RGX4 464 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CA11O75493 328 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 NUDT3O95989 172 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 NAPSAO96009 420 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 IGKV1D-33P01593 117 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 IGKV1-33P01594 117 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 GLAP06280 429 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 FCER2P06734 321 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 SCTP09683 121 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CD3GP09693 182 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 PTHLHP12272 177 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 GALP22466 123 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 BRS3P32247 399 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 MNDAP41218 407 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR3A3P47888 321 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 SERPINB10P48595 397 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CD81P60033 236 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 VBP1P61758 197 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 NCS1P62166 190 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 MRPS15P82914 257 aaKnown RBP3.87□□□□□ -1.79
VPS41-205ENST00000414632 MADCAM1Q13477 382 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 HMGN3Q15651 99 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 AANATQ16613 207 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CTF1Q16619 201 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ABCA11PQ4W5N1 156 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 MORN2Q502X0 79 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CT45A1Q5HYN5 189 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ZNF880Q6PDB4 577 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 SLC25A48Q6ZT89 311 aaKnown RBP3.87□□□□□ -1.79
VPS41-205ENST00000414632 FAM89BQ8N5H3 189 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 KLHDC1Q8N7A1 406 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR10A7Q8NGE5 316 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR52M1Q8NGK5 317 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR10R2Q8NGX6 335 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 OR2T6Q8NHC8 308 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CT45A3Q8NHU0 189 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 MPLKIPQ8TAP9 179 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CREB3L1Q96BA8 519 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 GALMQ96C23 342 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 RAB3CQ96E17 227 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ABHD14BQ96IU4 210 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 CMSS1Q9BQ75 279 aaKnown RBP3.87□□□□□ -1.79
VPS41-205ENST00000414632 FUNDC2Q9BWH2 189 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ZNF702PQ9H963 129 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 ABRACLQ9P1F3 81 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 RNF150Q9ULK6 438 aa3.87□□□□□ -1.79
VPS41-205ENST00000414632 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 SAA2-SAA4A0A096LPE2 208 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 IGKV1-6A0A0C4DH72 117 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 METTL21EPA6NDL7 271 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 MEIS3P1A6NDR6 274 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TMEM235A6NFC5 223 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TRIM64CA6NLI5 447 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 J3QRK9 145 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 MFNGO00587 321 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 BET1O15155 118 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 XRCC3O43542 346 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 GAPDHP04406 335 aaKnown RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 FCGR3AP08637 254 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 GSTT2P0CG29 244 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 GSTT2BP0CG30 244 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 SAA2P0DJI9 122 aaPredicted RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 HIST1H1DP16402 221 aaKnown RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 IL3RAP26951 378 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 CNTFRP26992 372 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 TALDO1P37837 337 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 CEACAM6P40199 344 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
VPS41-205ENST00000414632 RAB7AP51149 207 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 DYNLT3P51808 116 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 ARHGDIBP52566 201 aa3.86□□□□□ -1.79
VPS41-205ENST00000414632 LINC00205P59089 165 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms