RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SIT1Q9Y3P8 196 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 EYSQ5T1H1 3165 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 FAM90A9PA6NNJ1 464 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 ZNF891A8MT65 544 aaPredicted RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 GALR2O43603 387 aaPredicted RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 GCH1P30793 250 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 TDGF1P3P51864 188 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 UBE2G2P60604 165 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 RPP30P78346 268 aaKnown RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 MRPL49Q13405 166 aaKnown RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 ABHD17BQ5VST6 288 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 TDHQ8IZJ6 230 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 ZCCHC14Q8WYQ9 949 aaKnown RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 R3HDM4Q96D70 268 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 TRAV38-1A0A0B4J264 116 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 FAM166BA8MTA8 275 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 SMPD2O60906 423 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 ESDP10768 282 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 DEFA4P12838 97 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 EGR1P18146 543 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 KITLGP21583 273 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 RPS16P62249 146 aaKnown RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 FBXW9Q5XUX1 488 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 TIPARPQ7Z3E1 657 aaKnown RBP14.72□□□□□ -0.05
SDCBP-202ENST00000413219 TMEM251Q8N6I4 163 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 CMTM2Q8TAZ6 248 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 DERL1Q9BUN8 251 aa14.72□□□□□ -0.05
SDCBP-202ENST00000413219 ESPL1Q14674 2120 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 MYO15AQ9UKN7 3530 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 MARCH11A6NNE9 402 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 IQCF6A8MYZ5 107 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 RBFOX2O43251 390 aaKnown RBP eCLIP14.71□□□□□ -0.05
SDCBP-202ENST00000413219 ADMP35318 185 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 ZNF114Q8NC26 417 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 PRR7Q8TB68 274 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 TMEM68Q96MH6 324 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 WFIKKN1Q96NZ8 548 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 OR2J1Q9GZK6 312 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 ABI3Q9P2A4 366 aa14.71□□□□□ -0.05
SDCBP-202ENST00000413219 CXorf1O96002 111 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 STAG3L2P0CL84 134 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 STAG3L3P0CL85 134 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 SELEP16581 610 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 C20orf144Q9BQM9 153 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 IER2Q9BTL4 223 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 HES7Q9BYE0 225 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 LOXL2Q9Y4K0 774 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 NUPR1O60356 82 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TIMP3P35625 211 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 CEBPDP49716 269 aaPredicted RBP14.7□□□□□ -0.06
SDCBP-202ENST00000413219 EDDM3BP56851 147 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TPPP2P59282 170 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 GCSAMLQ5JQS6 135 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 PEAR1Q5VY43 1037 aaPredicted RBP14.7□□□□□ -0.06
SDCBP-202ENST00000413219 OR10G8Q8NGN5 311 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TBX15Q96SF7 602 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 ZPBPQ9BS86 351 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 ATG101Q9BSB4 218 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TMEM204Q9BSN7 226 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 QTRT1Q9BXR0 403 aaKnown RBP14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TMEM106BQ9NUM4 274 aa14.7□□□□□ -0.06
SDCBP-202ENST00000413219 AURKAIP1Q9NWT8 199 aaPredicted RBP14.7□□□□□ -0.06
SDCBP-202ENST00000413219 TRBV20OR9-2A0A075B6H5 130 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 A0A1B0GWJ7 208 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 LINC00473A8K010 186 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 IFNL4K9M1U5 179 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 YPEL1O60688 119 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 CER1O95813 267 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 TMPRSS3P57727 454 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 SPINK9Q5DT21 86 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 DCAF10Q5QP82 559 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 COQ2Q96H96 371 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 YPEL2Q96QA6 119 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 ZDHHC11Q9H8X9 412 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 ZNF705FA8MVS1 300 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-202ENST00000413219 GRPP07492 148 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 ZNF705DP0CH99 300 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-202ENST00000413219 ZNF705BP0CI00 300 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-202ENST00000413219 ARL14EPLP0DKL9 152 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 PLGLB1Q02325 96 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 AESQ08117 197 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 TEX43Q6ZNM6 134 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 C12orf49Q9H741 205 aa14.69□□□□□ -0.06
SDCBP-202ENST00000413219 MED12LQ86YW9 2145 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 A0A1B0GUS0 222 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 TNFSF13O75888 250 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 HPRT1P00492 218 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 ZXDAP98168 799 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 FAM53AQ6NSI3 398 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-202ENST00000413219 TREML4Q6UXN2 200 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 OR52E5Q8NH55 327 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 FAM216AQ8WUB2 273 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 IL36BQ9NZH7 164 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 LY96Q9Y6Y9 160 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 R4GN57 208 aa14.68□□□□□ -0.06
SDCBP-202ENST00000413219 WDR87Q6ZQQ6 2873 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 PGPEP1LA6NFU8 196 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 TNFSF15O95150 251 aa14.67□□□□□ -0.06
SDCBP-202ENST00000413219 BTF3P20290 206 aaKnown RBP14.67□□□□□ -0.06
SDCBP-202ENST00000413219 RANP62826 216 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms