RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 EXTL2Q9UBQ6 330 aa16.27■□□□□ 0.2
VSX1-204ENST00000409958 PRELID3BQ9Y3B1 194 aa16.27■□□□□ 0.2
VSX1-204ENST00000409958 WSB1Q9Y6I7 421 aa16.27■□□□□ 0.2
VSX1-204ENST00000409958 G3V318 75 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 CRYZL1O95825 349 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 CRYGBP07316 175 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 SLC6A1P30531 599 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 RPL30P62888 115 aaKnown RBP16.26■□□□□ 0.19
VSX1-204ENST00000409958 DYRK1AQ13627 763 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 DHRS11Q6UWP2 260 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 PPP1R27Q86WC6 154 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 ZBTB34Q8NCN2 500 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 OR5H2Q8NGV7 314 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 OSR1Q8TAX0 266 aaPredicted RBP16.26■□□□□ 0.19
VSX1-204ENST00000409958 DYNC2LI1Q8TCX1 351 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 ISOC1Q96CN7 298 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 CCL28Q9NRJ3 127 aa16.26■□□□□ 0.19
VSX1-204ENST00000409958 CCDC59Q9P031 241 aaKnown RBP16.26■□□□□ 0.19
VSX1-204ENST00000409958 SRRM4A7MD48 611 aaKnown RBP16.25■□□□□ 0.19
VSX1-204ENST00000409958 H3BMQ9 156 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 CA2P00918 260 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 PMP2P02689 132 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 RPLP1P05386 114 aaKnown RBP16.25■□□□□ 0.19
VSX1-204ENST00000409958 PSMB8P28062 276 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 RFX2P48378 723 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 ZNF66Q6ZN08 573 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 LYSMD2Q8IV50 215 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 MFSD4AQ8N468 514 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 SLC5A7Q9GZV3 580 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 TPSG1Q9NRR2 321 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 MEGF8Q7Z7M0 2845 aa16.25■□□□□ 0.19
VSX1-204ENST00000409958 FCGR3BO75015 233 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 EGR2P11161 476 aaPredicted RBP16.24■□□□□ 0.19
VSX1-204ENST00000409958 RCVRNP35243 200 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 FXYD4P59646 89 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 HERV-K104P61576 105 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 VMA21Q3ZAQ7 101 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 C19orf54Q5BKX5 351 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 TCTEX1D1Q8N7M0 179 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 MINDY2Q8NBR6 621 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 ABHD5Q8WTS1 349 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 C15orf40Q8WUR7 153 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 MIXL1Q9H2W2 232 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 TAS2R8Q9NYW2 309 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 NUBP2Q9Y5Y2 271 aa16.24■□□□□ 0.19
VSX1-204ENST00000409958 CTDSP2O14595 271 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 RGS5O15539 181 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 IGLV1-40P01703 118 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 PF4P02776 101 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 HLA-DMAP28067 261 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 HRH1P35367 487 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 UBE2KP61086 200 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 TMEM267Q0VDI3 215 aaPredicted RBP16.23■□□□□ 0.19
VSX1-204ENST00000409958 ECSCRQ19T08 205 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 LCNL1Q6ZST4 164 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 ZNF695Q8IW36 515 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 TEX45Q8NA69 505 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 TCTEX1D2Q8WW35 142 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 ZNF2Q9BSG1 426 aaPredicted RBP16.23■□□□□ 0.19
VSX1-204ENST00000409958 CEPT1Q9Y6K0 416 aa16.23■□□□□ 0.19
VSX1-204ENST00000409958 NUDT19A8MXV4 375 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 CDX1P47902 265 aaPredicted RBP16.22■□□□□ 0.19
VSX1-204ENST00000409958 FXYD3Q14802 87 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 AKIRIN2Q53H80 203 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 OR2B11Q5JQS5 317 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 C18orf65Q6ZTR6 163 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 TMEM17Q86X19 198 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 LAX1Q8IWV1 398 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 WFDC9Q8NEX5 89 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 OR4S2Q8NH73 311 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 MYOZ3Q8TDC0 251 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 ARPC1AQ92747 370 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 BORCS5Q969J3 196 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 DCUN1D5Q9BTE7 237 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 A3GALT2U3KPV4 340 aa16.22■□□□□ 0.19
VSX1-204ENST00000409958 ARPC1BO15143 372 aaKnown RBP16.21■□□□□ 0.19
VSX1-204ENST00000409958 KIR2DS2P43631 304 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 PJVKQ0ZLH3 352 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 TMEM65Q6PI78 240 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 ZNF818PQ6ZRF7 136 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 C8orf86Q6ZUL3 223 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 OR6F1Q8NGZ6 308 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 ABHD1Q96SE0 405 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 GPHA2Q96T91 129 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 FAM103A1Q9BTL3 118 aaKnown RBP16.21■□□□□ 0.19
VSX1-204ENST00000409958 FOXA2Q9Y261 457 aaPredicted RBP16.21■□□□□ 0.19
VSX1-204ENST00000409958 TNCP24821 2201 aa16.21■□□□□ 0.19
VSX1-204ENST00000409958 A0A1W2PN81 502 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 TNFSF12O43508 249 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 CNIH1O95406 144 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 GNRHRP30968 328 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 CHRNA7P36544 502 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 BRWD1-AS2P59051 145 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 SSBP2P81877 361 aaPredicted RBP16.2■□□□□ 0.18
VSX1-204ENST00000409958 UNQ5815/PRO19632Q6UWF5 114 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 ETV3LQ6ZN32 361 aa16.2■□□□□ 0.18
VSX1-204ENST00000409958 C1QL4Q86Z23 238 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms