RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RIPPLY3P57055 190 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 UBE2G1P62253 170 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 PCSK4Q6UW60 755 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 OBP2AQ9NY56 170 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 V9GYV3 84 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 SCO2A0A1W2PP80 73 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 SHISA8B8ZZ34 492 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 NPIPB11E5RHQ5 1161 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 G3V4G9 280 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 MT-CO2P00403 227 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 FGF12P61328 243 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 TRIM61Q5EBN2 209 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 OR1L1Q8NH94 360 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 ERRFI1Q9UJM3 462 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 KIAA2026Q5HYC2 2103 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 A0A1W2PR80 420 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 K7EN84 100 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 DHHO43323 396 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 NUDT3O95989 172 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 APCSP02743 223 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 PSG9Q00887 426 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 RBPJQ06330 500 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 PSG7Q13046 419 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 DAZAP2Q15038 168 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 Q56UQ5 140 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 LINC00596Q86U02 117 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 FAM19A2Q8N3H0 131 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 EAF1Q96JC9 268 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 KLRF1Q9NZS2 232 aa4.92□□□□□ -1.62
R3HDM1-202ENST00000409478 DOCK8Q8NF50 2099 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 A0A1W2PNR3 127 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 M0R2Z0 102 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 BMPR1BO00238 502 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 MPDU1O75352 247 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 HSBP1O75506 76 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 HLA-DRB1P01911 266 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 REG1BP48304 166 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 NHLH1Q02575 133 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 MRPL49Q13405 166 aaKnown RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 TMEM240Q5SV17 173 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 FAM162BQ5T6X4 162 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 FAM27BQ5VT28 67 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 RASL11AQ6T310 242 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 SFTPA2Q8IWL1 248 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 PIGCQ92535 297 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 C11orf52Q96A22 123 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 HES4Q9HCC6 221 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 KNTC1P50748 2209 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 THADAQ6YHU6 1953 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 hCG_38984A0A1B0GV85 526 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 SYNGR3O43761 229 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 IGLC1P0CG04 106 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 STAG3L2P0CL84 134 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 STAG3L3P0CL85 134 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 ARF1P84077 181 aaKnown RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 ZNF585BQ52M93 769 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 SAMD13Q5VXD3 122 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 LCN12Q6JVE5 192 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 FGFRL1Q8N441 504 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 FER1L6-AS1Q8NA97 138 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 OR5A2Q8NGI9 324 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 OR1F12Q8NHA8 337 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 SLC25A40Q8TBP6 338 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 C1RLQ9NZP8 487 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 ASXL3Q9C0F0 2248 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 LOC102724200A0A096LPH7 203 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 IGLV3-32A0A0A0MS00 114 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 TRAV38-1A0A0B4J264 116 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 GAGE10A6NGK3 116 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 CDIPTO14735 213 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 ARL14EPLP0DKL9 152 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 NPY1RP25929 384 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 CCR5P51681 352 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 RPL31P62899 125 aaKnown RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 MRPL54Q6P161 138 aaKnown RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 Q6ZSR6 202 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 OR2Y1Q8NGV0 311 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 CHRNA10Q9GZZ6 450 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 OSTCQ9NRP0 149 aa4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-202ENST00000409478 MUC21A0A0G2JKD1 596 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 MUC21A0A140T8X8 626 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 GJE1A6NN92 205 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 BCL3P20749 454 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 FBLP22087 321 aaKnown RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 CCL7P80098 99 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 RELBQ01201 579 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 HIST1H1AQ02539 215 aaPredicted RBP4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 KIAA1644Q3SXP7 199 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 ZNF718Q3SXZ3 478 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 RNFT1Q5M7Z0 435 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 MUC21Q5SSG8 566 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 ERASQ7Z444 233 aa4.9□□□□□ -1.62
R3HDM1-202ENST00000409478 TMEM70Q9BUB7 260 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms