RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GPR12P47775 334 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 TNFSF10P50591 281 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 IGFBPL1Q8WX77 278 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 OR4C12Q96R67 309 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 RAB40CQ96S21 281 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 PARD6AQ9NPB6 346 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 SIRT7Q9NRC8 400 aa11.27□□□□□ -0.61
COL6A2-204ENST00000409416 A0A1B0GWJ7 208 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 LRP5LA4QPB2 252 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
COL6A2-204ENST00000409416 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ZADH2Q8N4Q0 377 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ZPBPQ9BS86 351 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 C17orf98A8MV24 154 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 SLC38A11Q08AI6 406 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF718Q3SXZ3 478 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 GCSAMLQ5JQS6 135 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 WDR86Q86TI4 376 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
COL6A2-204ENST00000409416 RBKSQ9H477 322 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 POLDIP2Q9Y2S7 368 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 J3QT63 122 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 CYC1P08574 325 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 BCL2P10415 239 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ASPHD1Q5U4P2 390 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF324BQ6AW86 544 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-204ENST00000409416 OR13A1Q8NGR1 328 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BHQ93079 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 CCL13Q99616 98 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BNQ99877 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 HIST1H2BMQ99879 126 aa11.26□□□□□ -0.61
COL6A2-204ENST00000409416 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF737O75373 536 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 FGF7P21781 194 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 CHRNA7P36544 502 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 A0A1B0GU03 582 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 C21orf140B9A014 251 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 SMPD2O60906 423 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 OR2V2Q96R30 315 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 LAMP3Q9UQV4 416 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 ABCA2Q9BZC7 2435 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
COL6A2-204ENST00000409416 RTP5Q14D33 572 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
COL6A2-204ENST00000409416 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 SARAFQ96BY9 339 aa11.25□□□□□ -0.61
COL6A2-204ENST00000409416 TRAV38-1A0A0B4J264 116 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 LIN7CQ9NUP9 197 aaKnown RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 PGPEP1LA6NFU8 196 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 CLDN34H7C241 214 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 IFNA1P01562 189 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 GYPAP02724 150 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 SOD3P08294 240 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 CDX1P47902 265 aaPredicted RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 SELENOVP59797 346 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 RPL30P62888 115 aaKnown RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 ABHD12Q8N2K0 398 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 BCL2L2Q92843 193 aaPredicted RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 SEBOXQ9HB31 216 aaPredicted RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 GOLT1BQ9Y3E0 138 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
COL6A2-204ENST00000409416 DYSFO75923 2080 aa11.24□□□□□ -0.61
COL6A2-204ENST00000409416 TRAV17A0A0B4J275 112 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms